Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03617 ATGAGTAACACAGAGAGAACTCAAGGTGTTAAGAAATGGTTCAAGTCTTCACAGGTTCTCCTTAGCATGTTATTAGTACAAATTTTTGCAACTGGGTTGCAACTTCTATCAAGAATCATTTTGGTTCAAGGAACTTACATATTTGCCCTCACTGCTTATCGTCATATTGTTGCTGCAATTTGTGTTGCCCCCTTTGCATTCTACTTTGAAAGAGGACTGGCGAAGAATTTCAACTGGAGAGTTTGGCTGTGGCTTTTCTTTAATGGTTTGGTGGGGATGACCATGTCTATTGGACTTTTCTACTATGGTCTTCGAGACACGTCAGCTACATACTCTGTCAACTTTCTCAACCTGATTCCTATTTGCACATTCTTGATTTCTATCATTTGCAGAATAGAGAATATGAAGATTAGAACATGGAGTGGTAAAGCTATGTGTATTGGAGCAATAATGTGTGTTGGTGGAGCATTAGTTACAACTCTTTACAAAGGGAAGGAATTTTATATTGGTCATCATCATATTCACCATTCTATTGAGATAAGTGTTGTTGCATCACACAAAACTCACATGCTTCGTGGAACTTTGTGTTTGATTGGATCCTGCTGCTCTTTCACAGCTTGGTTTATTCTTCAAGTAAAATTTGTGAAAGTATTTCCATTAAGGTATTGGGGAACAATGTTATCATGCATTATGGCATCAATTCAGTCAGCAGTAATAGGTGCATACATAGATCCCAGAAAAGAAGTTTGGAGATTAGAGTGTAATCTACAACTCATTACTATATTTTACTCGGGTGCATTGGCTACTGCTGCAACATTTTGTTTAGTATCATGGGTAATTACAATCAAGGGACCTACTTACCCTCCAATGTTCAATCCATTGGCTCTAGTTTTCATTGCCATATCGGAGGTTATCATACTTGGTGAACCACTAAAAGTTGGAACGTTGGTGGGTATGATTTTGGTCATAATGGGATTGTACTACTTTTTATGGGGCAAAAGGAATATGATTCCACGTTTGCCTAAACCAAATGTAGCAGCTGCTACATTATCAACAAGCATGGCTGATGACCCTCCCATGGCTCAATCAACGGCCATAATAGTTCCAAGTTTTTCACCTGATGAGAGTGTACTTATTGAAATTGATAAAATTGGGAAAAACTAA 1164 0.3797 MSNTERTQGVKKWFKSSQVLLSMLLVQIFATGLQLLSRIILVQGTYIFALTAYRHIVAAICVAPFAFYFERGLAKNFNWRVWLWLFFNGLVGMTMSIGLFYYGLRDTSATYSVNFLNLIPICTFLISIICRIENMKIRTWSGKAMCIGAIMCVGGALVTTLYKGKEFYIGHHHIHHSIEISVVASHKTHMLRGTLCLIGSCCSFTAWFILQVKFVKVFPLRYWGTMLSCIMASIQSAVIGAYIDPRKEVWRLECNLQLITIFYSGALATAATFCLVSWVITIKGPTYPPMFNPLALVFIAISEVIILGEPLKVGTLVGMILVIMGLYYFLWGKRNMIPRLPKPNVAAATLSTSMADDPPMAQSTAIIVPSFSPDESVLIEIDKIGKN 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03617 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 153 - -
Trre9g03617 387 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020
Trre9g03617 387 Pfam EamA-like transporter family 21 153 IPR000620 GO:0016020
Trre9g03617 387 PANTHER WAT1-RELATED PROTEIN 19 337 IPR030184 GO:0016020|GO:0022857
Trre9g03617 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03617 Trre-Chr9 44727447 44732419 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03617 21 333 Nodulin-like Gene Family AT1G09380 36.909 1.16e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03617 - - gmx:100782551 501.516