Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03609 ATGGCTTCTATGAGCCATATTCTCCTCTTATTTTGCTTCTTCAATCTAAGAACACATCTAGTATCATCAGCTTATTCAGCTAGTGATGTTCCAATCAATGTAACCAAACACTTCTCTTTCCTAGATTTCAGCTTAACTAATAACTCAAGATTAGTCCATGATTTGAAGCTTCTAGGAAATGCAAAGTTTTCAAATGAAAAGGGTTCACTTCAAATCCCAAATGAATCACAAGAAACAGATATAAGACATCAAGCAGGTAGAGGTTTATATTCCTTCCCGATTCGTTTGTTAGATCCAATTACCAAAACACCAGCTTCTTTTCAAACCACCTTTTCTTTTCAGCTTAATAATTTAAGTACTAATTCTGATTTAAGTGATTATGGTGGTGGTAGTGGACTTACCTTTATCATTGTACCTGATGAGTTCACTGTTGGAAGGCCAGGACCTTGGCTTGGTATGCTTAATGATGCTTGTGAGAACGATTATAAAGCGGTTGCAATTGAGTTTGATACGCGAAAGAATCCGGAATTTGGTGATCCAAATGATAATCATGTTGGTATTAATTTAGGTAGCATAGTATCTACTAAAATTATCAATGTTTCTGATGTTGGAGTTTCACTTAAAGATGGTTTTGTTCACCATGCTTGGATCGATTATGACGGTCCACGAAGGAGAATTGATATTCGTTTAGGACTTGCGAACGAAGAAGATTATCCTATCAAGCCTATCTTCTCGGAATTTATGGATCTCTCGCCTTATCTCAATGAGTATATGTTTGTAGGATTCTCAGCTTCAACCGGTAACCACACACAAATTCACAACATACTTTCTTGGAACTTTACTTCAAATAGCCAAGCTTTTCTTCGCTATCCTTCATCTGAAACATGTCAAGGTAAGATCATGCTTGAGAATACTACAGAAACAACAGCAGCTACCGATAAGAAATCTAATAGGAACGAACCTCCGCGAAGTTTTTTGATTTTTGTGGCTGCTGTAGTGTTGGCTTTGGTTGTTTTAGTTGGTTTTTACTTTATCAGCAGACACAGAAGAAGTGTTTCTAAATCAAAGCTTTCTATAGAGGAAGATATTCATAGGCCAAGGCCTCCTAACAAACCACGCCGCTTCGCTTTTTCAGCAATTTCCTCTTCGACTAGATCATTCAGTGAGATAGAAGTACTTGGAAGTGATACTAGAGGAGTATACTACAGAGGAAAGCTTAGTAATGGAAGCCAAGTAGCTGTGAAAAGATTCTCAACTGAATTTCTCAACACACACGGATCCGATAAGAAGCGTTTGTTGAAAGAAATCAGAGTCATTAGTCATGTTCGTCACCCGAATTTGCTTCCTATAAGGGGATGGTGTCAAGACAACAATGAAATCATTGCAGTCTATGATTTTGTCCCTAATGGAAGCCTCGATAAATGGCTATTCGGAGCTGGTGTTCTTCCTTGGACACGTCGGTTCAAAGTGATCAAAGATGTAGCCGACGGCTTGAGTTTCTTGCACAGTAAACAACTAGCTCACAAGAACATGAAATGCAGCAGTGTTTTTCTAGATGTCAGCTTCAGAGCTGTTTTGGGAGATTTTGGATTTGTGCTATTGGGAGCAGAATCAAAACAGTTTGAATCAGTCGTGTGTAATGGTGCTGATGTGTTTGAGTTTGGTGTGATTGTGTTGGAAGTGATAGGTGGAAGGCCAAGAGTGGAAGAAGAAACAGATGAAGAAAAACCAGAAGAGAGGAACTTATTGGATTATGCATGGAACTTGCATGAGACTGGTGAGAAAGTGAAGCTGGTTGATAGAAGAATGGGATCATTGATCAATTTGGAGCAAGCGATTCGAGTTATGGAAATAGGGTTGCTTTGTACTTTGAATGAGAACAAAGGAAGACCTTCCATGGAGCAAGTTGTAGAGCTTCTGCATAACATGGAGAAGCCTATTCCTGAGTTGCCAAGAACAAGACCAGTTGCTTTGTTTCCTTATAACAGTGCCAACACTGGACTTTGCAATAATTACTCTTGCACTTTGAAGCTGTGA 2037 0.3898 MASMSHILLLFCFFNLRTHLVSSAYSASDVPINVTKHFSFLDFSLTNNSRLVHDLKLLGNAKFSNEKGSLQIPNESQETDIRHQAGRGLYSFPIRLLDPITKTPASFQTTFSFQLNNLSTNSDLSDYGGGSGLTFIIVPDEFTVGRPGPWLGMLNDACENDYKAVAIEFDTRKNPEFGDPNDNHVGINLGSIVSTKIINVSDVGVSLKDGFVHHAWIDYDGPRRRIDIRLGLANEEDYPIKPIFSEFMDLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSNSQAFLRYPSSETCQGKIMLENTTETTAATDKKSNRNEPPRSFLIFVAAVVLALVVLVGFYFISRHRRSVSKSKLSIEEDIHRPRPPNKPRRFAFSAISSSTRSFSEIEVLGSDTRGVYYRGKLSNGSQVAVKRFSTEFLNTHGSDKKRLLKEIRVISHVRHPNLLPIRGWCQDNNEIIAVYDFVPNGSLDKWLFGAGVLPWTRRFKVIKDVADGLSFLHSKQLAHKNMKCSSVFLDVSFRAVLGDFGFVLLGAESKQFESVVCNGADVFEFGVIVLEVIGGRPRVEEETDEEKPEERNLLDYAWNLHETGEKVKLVDRRMGSLINLEQAIRVMEIGLLCTLNENKGRPSMEQVVELLHNMEKPIPELPRTRPVALFPYNSANTGLCNNYSCTLKL 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03609 678 FunFam Putative L-type lectin-domain containing receptor kinase S.7 isoform A 35 290 - -
Trre9g03609 678 Gene3D Transferase(Phosphotransferase) domain 1 467 545 - -
Trre9g03609 678 SUPERFAMILY Concanavalin A-like lectins/glucanases 41 284 IPR013320 -
Trre9g03609 678 Gene3D Phosphorylase Kinase; domain 1 346 466 - -
Trre9g03609 678 Gene3D Transferase(Phosphotransferase) domain 1 546 649 - -
Trre9g03609 678 SUPERFAMILY Protein kinase-like (PK-like) 365 640 IPR011009 -
Trre9g03609 678 PANTHER - 67 642 - -
Trre9g03609 678 ProSiteProfiles Protein kinase domain profile. 387 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03609 678 CDD lectin_legume_LecRK_Arcelin_ConA 37 283 IPR001220 GO:0030246
Trre9g03609 678 Pfam Legume lectin domain 37 286 IPR001220 GO:0030246
Trre9g03609 678 Gene3D - 34 287 - -
Trre9g03609 678 FunFam Lectin-domain containing receptor kinase A4.2 467 648 - -
Trre9g03609 678 Pfam Protein tyrosine and serine/threonine kinase 390 532 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03609 Trre-Chr9 44685148 44687184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03609 9 659 Receptor kinase-like Gene Family AT5G55830 32.230 4.94e-97 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre9g03609 Lectin_legB 1.5e-55 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03609 - - gmx:100781464 1085.86