Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03586 ATGGCCACCAATCAAGGTGTCCTTTCATCTCTTGACAATGCCAAAACACAAAGTTACCATTACATGGCAATAGTCATAGCAGGAATGGGATTTTTCACCGATGCATACGATCTTTTTTGCATTACCGCAGTTACAAAGCTTATCGGTCGTTTGTACTATTCCGATCCGACTAGCCATCTTCCAGGAATACTTCCAACAAATGTAAACAATGCAGTAACGGGTGTCGCATTGTGCGGCACCCTTGCGGGACAACTCTTCTTTGGCTGGCTTGGAGACAAACTTGGTAGAAAAAAAGTTTATGGCATAACTCTTACCACAATGGTTGGTTTTGCTTTATTATCAGGTCTTTCGTTTGGTTCCACGTCGAAAACTGTGGTTACTAGTCTTTGTTTCTTTAGATTCTGGCTAGGATTCGGTATCGGTGGAGACTATCCTCTCTCAGCAGTGATCATGTCTGAATATGCAAATCAAAAAACAAGAGGAAGTTTTATTGCTGCGGTTTTTGCTATGCAAGGAGTTGGAATATTGGTTGCCGGAGGCGTGGCCATGTTTGTCTCGCAACAATTCTTATCGGCTTTTCCAGCTCCTGACTTCGAAACCAATCCTGTTTTATCCACTCAACCAGAAGGAGATTTTGTTTGGAGAATTGTGTTAATGTTTGGCGCAGTTCCTGCGGCGTTAACTTATTATTGGCGAATGAAAATGCCAGAAACCGCGAGATACACTGCTTTGGTTGAAGGAGATCACAAGAAAGCCGCTGAAGATATGGCAAAAGTTCTTGATAAGAACATACTTGTAGAAGAATCTAATACCAAGATTGATACCGGGCCACTCGCTTCAAACTCCTATGGACTCTTCTCTTCGGAGTTTCTCGAAAGGCATGGACTTCACCTTCTAGGAACAACTAGCACATGGTTTTTATTGGATATTGCTTTCTACAGTCTTCAATTAACACAAAAAGATATTTATCCAGCTAGTGGACTTGTATACAAGGCTTCCAAAATGAATGCTATTGAGGAAGTGTTTCAACTTTCTCGAGCGATGTTCGTAGTTGCCTTGGTCGCCACGGTACCTGGATACTGGGCGACCGTTTTCCTAATCGACAAGATCGGCCGGTACAGAATCCAGCTTGTTGGATTTCTTGTTATGTGTGTTTGTATGTGGTTTCTTGGACACAATTATAGAGACTACAGGGGAGAAGCATCAAAATGCAAGAAAGAATCAAAATATGACTATTGTGATGGAAACCTAATCATGTTTGCTATACTTTTTGGACTTACACTTTTCTTTGCTAACTTTGGACCTAATAGTACTACATTTATAGTGCCGGCAGAACTGTTCCCTGCAAGGCTCCGTTCCACGTGTCATGGGATATCGGCGGCAGCAGGAAAATCGGGAGCTATCATCGGTTCTTTTGGGGTGCAAAGCTATATAAGTAATTCACATGATAAAACAAAAGCAATCAAGCAAGCAATTATGGCACTTTCTTTTGTCAACTTGCTTGGATTCTTTTTCACTTTCTTGGTTCCGGAAACACAAGGTCGATCACTCGAAGAAATCTCAGGAGAGGATAAAGAAATCCAAGGAAACATTGCAGATGAGGCAATAAATGATGCAAAAGAGGGAACAATAAACATTAGTGTTGATAAATCTCCAGGAACTTCAATGGTTTAG 1674 0.414 MATNQGVLSSLDNAKTQSYHYMAIVIAGMGFFTDAYDLFCITAVTKLIGRLYYSDPTSHLPGILPTNVNNAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGITLTTMVGFALLSGLSFGSTSKTVVTSLCFFRFWLGFGIGGDYPLSAVIMSEYANQKTRGSFIAAVFAMQGVGILVAGGVAMFVSQQFLSAFPAPDFETNPVLSTQPEGDFVWRIVLMFGAVPAALTYYWRMKMPETARYTALVEGDHKKAAEDMAKVLDKNILVEESNTKIDTGPLASNSYGLFSSEFLERHGLHLLGTTSTWFLLDIAFYSLQLTQKDIYPASGLVYKASKMNAIEEVFQLSRAMFVVALVATVPGYWATVFLIDKIGRYRIQLVGFLVMCVCMWFLGHNYRDYRGEASKCKKESKYDYCDGNLIMFAILFGLTLFFANFGPNSTTFIVPAELFPARLRSTCHGISAAAGKSGAIIGSFGVQSYISNSHDKTKAIKQAIMALSFVNLLGFFFTFLVPETQGRSLEEISGEDKEIQGNIADEAINDAKEGTINISVDKSPGTSMV 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03586 557 CDD MFS_PhT 24 512 - -
Trre9g03586 557 Pfam Sugar (and other) transporter 24 521 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre9g03586 557 FunFam Inorganic phosphate transporter 1-6 19 535 - -
Trre9g03586 557 SUPERFAMILY MFS general substrate transporter 12 522 IPR036259 -
Trre9g03586 557 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 519 - -
Trre9g03586 557 Gene3D MFS general substrate transporter like domains 273 538 IPR036259 -
Trre9g03586 557 Gene3D MFS general substrate transporter like domains 20 261 IPR036259 -
Trre9g03586 557 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 514 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03586 Trre-Chr9 44519794 44521467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03586 1 523 Inorganic Solute Cotransporters AT5G43360 61.914 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03586 K08176 - gmx:100820250 865.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03586 9 44519794 44521467 Trre9g03586 9 44519794 44521467 ECH