Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03578 ATGGTCTATGAATTTATGCCTCGTGGCAGCTTGGAGAATCACTTGTTCATCAGAGGATCATATTTTCAACCTCTTTCTTGGAACCTCCGTTTGAAGGTCGCTCTTGGTGCTGCAAAAGGCCTTGCATTTCTTCACAGTGCTGAAACAAAAGCGGCATACCGTGAATTCAAGATTTCAAATGTCTTGCTAGATTCAGGCGGGATTGCGGTTGATAAAAGTCATGTCTCCAACAGGCTAACCTATGGATATGCAGCTCCAGAATACCTAGCCACTGGTAATCACAGTGGTAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTATTGGAAATATTATCAGGGAGGAGAGTTGTTGACAAGAATAGACCACAAAGACAACACAATTTGGTGGAATGGGCTAAACCTTATCTATCCAACAAGCGCAAGATTTTGCGCGTGTTGGATAATCGCCTTGAAGGCCAATACGAATTGGAAGATGTTTATAAGGTTGCTATACTCTCCCTACGGTGCCTTTCAATAGAAGCCAAGTTGAGACCAAACATGGATGATCTTGTTACAAATTTGGAGCAGTTGCAGGCTCCTAATGTAAATGGATGCAATCAGTATCGTTTACGTAGAAGAAGTGCTGATGATGTTCCCCGTGTTAGAACAGCCACGGCTTATCCCCAACGCTCTATGTCTATGCTTTGTTCATGA 693 0.4286 MVYEFMPRGSLENHLFIRGSYFQPLSWNLRLKVALGAAKGLAFLHSAETKAAYREFKISNVLLDSGGIAVDKSHVSNRLTYGYAAPEYLATGNHSGKSDVYSFGVVLLEILSGRRVVDKNRPQRQHNLVEWAKPYLSNKRKILRVLDNRLEGQYELEDVYKVAILSLRCLSIEAKLRPNMDDLVTNLEQLQAPNVNGCNQYRLRRRSADDVPRVRTATAYPQRSMSMLCS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03578 230 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03578 230 SMART tyrkin_6 1 187 IPR020635 GO:0004713|GO:0006468
Trre9g03578 230 PANTHER OS01G0588500 PROTEIN-RELATED 1 191 - -
Trre9g03578 230 SUPERFAMILY Protein kinase-like (PK-like) 1 193 IPR011009 -
Trre9g03578 230 Gene3D Transferase(Phosphotransferase) domain 1 6 206 - -
Trre9g03578 230 Pfam Protein kinase domain 1 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03578 Trre-Chr9 44489404 44490545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03578 1 187 Glycoside Hydrolase AT3G07070 44.335 1.10e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trre9g03578 Pkinase 4.4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03578 - - gmx:100798404 311.227