Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03569 ATGAAATTGCTTTCACCGCCAATGATGTTTTCTCTAATACTTTTGATTAGTTCATTTTATCTTGGTAATGCAATAGATTGTGGTGGCAATCGAATTGCAAATACCATTGTTGTTAACCAACAAGGTCAAGGAGCATTCCAAACAATTCAAGCAGCCATTGATTCTATAAAGAGCCAAAATAATCAATGGATTTTGCTTCAAATAAATCCTGGCATATATAATGAAAAAGTTCATATACCTATTGAAAAGCCATGCATTATTTTAAGAGGATCGGGTAGCAAAACAACAATCGTTGCTTACAATGATTCAGCTAATAATGTTGGCACATCTGATAGTGCTACATTCATTTCATCTCCACCTAACGTAGTTGTGAGTGGCATTTCATTCAAGAATACACATGGACCCGACGGACCTGCCGTAGCAGCTAACTTTTATGGTGATAAATCAGCCATATTTGAATGTAGCTTCTTTGGTTATCAAGATACATTGCTCATATCATCTGGACGCTCTTATTTTAAAAATTGTTTTATTCAAGGTGAAGTAGACTTCATTTTTGGTTCGGGACAATCTTATTTTGAGAATTGTGTCATTAATGCTGTACAAGGAACATCCAAACCTATAGGTTTTGTCACAGCACAATTTAGAGATAAACCAAATGACCCAAACGGATTTGTTTTTAAAGGAGGATCTGTTGTTGGAACTGGTCAAGTGAATCTTGGAAGACCTTGGGCCCCTTACTCAAGAGTCATATTTTGGGAAACATATTTTTCCTCTGTGGTAACTCCAGAAGGATGGGACCTTTGGAATGTGAGAAAAGACCAAGAGCAAAATATCTTCTTTGCGGAAGTTAATTGTAAAGGACCAGGGGCCAATACTAGGAACCGTGTCAAGTGGGAGAAAAATGCTCATAGCATAAACTTAAATGAATATACTTTATCATCTTTTATAAATAATGATGGATGGCTTGCTAATATACCGTCTATATAA 987 0.3597 MKLLSPPMMFSLILLISSFYLGNAIDCGGNRIANTIVVNQQGQGAFQTIQAAIDSIKSQNNQWILLQINPGIYNEKVHIPIEKPCIILRGSGSKTTIVAYNDSANNVGTSDSATFISSPPNVVVSGISFKNTHGPDGPAVAANFYGDKSAIFECSFFGYQDTLLISSGRSYFKNCFIQGEVDFIFGSGQSYFENCVINAVQGTSKPIGFVTAQFRDKPNDPNGFVFKGGSVVGTGQVNLGRPWAPYSRVIFWETYFSSVVTPEGWDLWNVRKDQEQNIFFAEVNCKGPGANTRNRVKWEKNAHSINLNEYTLSSFINNDGWLANIPSI 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03569 328 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 32 323 - -
Trre9g03569 328 FunFam Pectinesterase 30 326 - -
Trre9g03569 328 Pfam Pectinesterase 36 318 IPR000070 GO:0030599|GO:0042545
Trre9g03569 328 Gene3D - 29 327 IPR012334 -
Trre9g03569 328 SUPERFAMILY Pectin lyase-like 32 322 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03569 Trre-Chr9 44427277 44430191 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03569 10 275 Carbohydrate Esterase AT2G19150 46.739 8.86e-74 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03569 - - tpra:123922273 385.185