Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03568 ATGGAGCCTTTTAGGGTCAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCACAAAACTTTTGAACAAATTCATTCCAAAACTCTCGCATGATGCAGATGGTCTCATATTTCAGGGATGGGACGATCCTTATGTACCTCGCACTTATGAAGGTCTCTTAAAGTGGAAGTATGCTGATCTGGATTCAGTTGATTTTCTCTTTGAGATTGATGATGATCGTCAGCTTCTTTTTCTCTATGAACGTGGAAAAAAGAAACTCATGGAAGGGTATATTGTTGCATTCGAAGGCATCAGATGCAACAACTGTCAAAATGTTGGTGCTACAAGTGGAGATTTTATTCAGCTCACTTGTATGTGTAAAGATGAGCTTGACATTGGACACATTAATTGTTCTGAGGTATCAATCCAGAGATTACATGAAAATACTGATAGGAGCTTAAGGACCTATTTAAGCAATGGTGATCTTAATGGATGA 474 0.384 MEPFRVRRKDFWLLSTVTKLLNKFIPKLSHDADGLIFQGWDDPYVPRTYEGLLKWKYADLDSVDFLFEIDDDRQLLFLYERGKKKLMEGYIVAFEGIRCNNCQNVGATSGDFIQLTCMCKDELDIGHINCSEVSIQRLHENTDRSLRTYLSNGDLNG 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03568 157 PANTHER MRNA-CAPPING ENZYME 2 90 - -
Trre9g03568 157 Gene3D - 1 72 - -
Trre9g03568 157 Pfam mRNA capping enzyme, catalytic domain 2 56 IPR001339 GO:0004484|GO:0005524|GO:0006370
Trre9g03568 157 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 2 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03568 Trre-Chr9 44423056 44424985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03568 1 94 Protein tyrosine phosphatase (PTP) family AT5G01290 71.875 5.05e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03568 K13917 - gmx:100803597 185.652