Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03567 ATGGATAATAATACTAATAATATCTCTAAAAGTGTGAAAAAGAAAGTGGTAATCAATGAACTTGTTAAGGGACAAGAAGCTGCAACCAAACTCAAGTTTCTTCTTCAGAATCAGAAAAATCATCCTTTTGGTGATGGCTCTCTCTCATCCTATAAACTTGCTGCAAATGTTCTCAGATCTTTCACTGAAGCTCTTTCTATTATCTCTCAACCAGCTGATTGTGATGAGTTTCTGAATCTTCTCAATTATGGCGAAAATGGGTTGCCCGTTGTCGTCTCCGGTAATCATCCACCGTCTAATGGGATTAAGAAGAGTTCATTGCTTGCTAAGGGTGGTAGAGGTTGCTACAAAAGAAGGAAGAATGAAGAGAGATGGAGCATAGTTTCCCCGACTATTGATGATAATTATTCATGGAGAAAGTATGGACAAAAGGAAATAATGAATTCTGAATTCCCTAGGAGTTACTTGAGGTGCACGTTTAAGAATGATCAAGGTTGCTTAGCAACAAAACAAGTGCAAAAGACACAAGACAATCCTGATATGTATCAAATTACTTACATTGGTATTCACACATGCAACACAATCCTTAATAATGAGGTAGTTCTTGTGAATTCTGATCCTGATGAAGTGAAAGTATTAACACCAAGCATAACTATAAAACAAGAATATCCCAAACAAGAACCGAGTAAAGTTATGGAATCTGATGATATATTTCAAAGTTTAGCACTGGAACTTGGTGACATTGATTTCTACTTTGATGAAAATTAA 768 0.3581 MDNNTNNISKSVKKKVVINELVKGQEAATKLKFLLQNQKNHPFGDGSLSSYKLAANVLRSFTEALSIISQPADCDEFLNLLNYGENGLPVVVSGNHPPSNGIKKSSLLAKGGRGCYKRRKNEERWSIVSPTIDDNYSWRKYGQKEIMNSEFPRSYLRCTFKNDQGCLATKQVQKTQDNPDMYQITYIGIHTCNTILNNEVVLVNSDPDEVKVLTPSITIKQEYPKQEPSKVMESDDIFQSLALELGDIDFYFDEN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03567 255 Gene3D WRKY domain 121 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre9g03567 255 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 21 211 IPR044810 GO:0003700
Trre9g03567 255 Pfam WRKY DNA -binding domain 133 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre9g03567 255 ProSiteProfiles WRKY domain profile. 132 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre9g03567 255 SMART WRKY_cls 132 194 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre9g03567 255 SUPERFAMILY WRKY DNA-binding domain 129 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03567 Trre-Chr9 44410794 44414049 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03567 1 216 WRKY Transcription Factor Family AT2G40750 37.238 6.94e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre9g03567 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03567 - - mtr:11424834 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03567 9 44410794 44414049 Trre9g03567 9 44410794 44414049 ECH