Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03560 ATGCCGAATCCAAATACAAATCAAAATCATCCACACCGTTCCAAAACTCGACCGTCCACGTCATCATCTCGACCATCATCATCCCGACACCACCAACAACAACCACCACCACCGGTTCAACCACGAGTTCCGTTACGGCAGTTACTCCGAGTAGCATCAGTAGCAAGTGGAATTCAATTCGGTTGGGCTTTACAGCTTTCACTATTAACACCCTACGTTCAACAATTAGGTATCCCTCATCAATGGGCGAGTATAATCTGGTTATGTGGACCGGTTTCCGGTTTATTTGTTCAACCGTTAGTCGGTCATTTAAGTGATAAGTGTTCGAGTAAATTCGGTCGCCGGAGACCGTTTATTGTCGTCGGCGCCGCTTCGATCGTCATCGCTGTTATTATAATTGGTTATGCTGCTGATATTGGTTGGTTGATTGGTGATGATGTTGAACAAAGTTATCGTCCTTTTGCGATAATTGTTTTTGTTATTGGATTTTGGATTCTTGATGTTGCTAATAATGTTACTCAAGGTCCTTGTAGAGCTTTACTTGCAGATCTCACAAGAAATGATGCTCGAAGGACACGTGTTGCAAATGCTTATTTCTCCTTGTTTATGGCCGTTGGTAACATTCTTGGCTATGCAACTGGGTCATACAGTGGCTGGTACAAGATTTTTAAATTCACACTTACCCCTGCTTGCTCTATTAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACGTTGCTTTCATTGCGGTAACGACATATCTCAGCATCGCGTCAGCTCATGAAGTGCCTCTAAGTTCAAGTGGACCAGTACATGCTGGAGAAGGAGCAGGAGAGACAGAAGAAGCTTTCATGTGGGAATTGTTTGGGACATTCAAATATTTTTCAATGCCTATATGGATAGTACTGTCTGTAACTGCTCTGACATGGATTGGGTGGTTCCCATTTATTCTCTTTGATACTGATTGGATGGGTCGGGAAATTTATGGCGGTGATCCAAATGGAGGCCTTATTTATGACAGTGGAGTTAGAATGGGAGCACTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAGTAACATCATTGCTTATGGAAAGGCTATGCAGGAAGCGAGGGGCTGGTTTTGTGTGGGGAATCTCAAATATATTTATGGCTCTTTGCTTTATAGCAATGTTAGTATTAACCTATGCTGCAAATAGCATTGGCTACGTAAGTAAAGGTCAACCACCACCAACAGGCATTGTGATCGCAGCGTTAGCAATCTTTACCATTCTTGGGTTTCCACTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCCACGCATATCGAACCATTGGGACTTGGCCAAGGGTTGTCAATGGGTGTCCTAAATCTGGCAATAGTGGTCCCACAGATTGTGGTGTCCCTGGGAAGTGGACCGTGGGATCAGATATTTGGTGGAGGAAACTCTCCAGCCTTTGCCGTGGCAGCTGTTGCAGCCCTTTTCAGTGGACTCTTAGCTCTATTAGCTATTCCCCGAACACGTACCCAAAAGCCTCGAAGCCGTGTATGA 1557 0.4399 MPNPNTNQNHPHRSKTRPSTSSSRPSSSRHHQQQPPPPVQPRVPLRQLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHQWASIIWLCGPVSGLFVQPLVGHLSDKCSSKFGRRRPFIVVGAASIVIAVIIIGYAADIGWLIGDDVEQSYRPFAIIVFVIGFWILDVANNVTQGPCRALLADLTRNDARRTRVANAYFSLFMAVGNILGYATGSYSGWYKIFKFTLTPACSISCANLKSAFFLDVAFIAVTTYLSIASAHEVPLSSSGPVHAGEGAGETEEAFMWELFGTFKYFSMPIWIVLSVTALTWIGWFPFILFDTDWMGREIYGGDPNGGLIYDSGVRMGALGLLLNSVVLGVTSLLMERLCRKRGAGFVWGISNIFMALCFIAMLVLTYAANSIGYVSKGQPPPTGIVIAALAIFTILGFPLAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVVPQIVVSLGSGPWDQIFGGGNSPAFAVAAVAALFSGLLALLAIPRTRTQKPRSRV 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03560 518 MobiDBLite consensus disorder prediction 1 42 - -
Trre9g03560 518 SUPERFAMILY MFS general substrate transporter 46 512 IPR036259 -
Trre9g03560 518 NCBIfam sucrose/proton symporter 43 511 IPR005989 GO:0005886|GO:0008515|GO:0015770
Trre9g03560 518 Gene3D MFS general substrate transporter like domains 294 515 IPR036259 -
Trre9g03560 518 Gene3D MFS general substrate transporter like domains 45 262 IPR036259 -
Trre9g03560 518 MobiDBLite consensus disorder prediction 1 30 - -
Trre9g03560 518 Pfam MFS/sugar transport protein 63 211 - -
Trre9g03560 518 CDD MFS_SLC45_SUC 48 504 - -
Trre9g03560 518 FunFam Sucrose transport protein 42 506 - -
Trre9g03560 518 PANTHER SUGAR TRANSPORTER 42 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03560 Trre-Chr9 44330225 44342652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03560 5 514 Sucrose Transporter Gene Family AT1G09960 68.411 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03560 K15378 - gmx:100820483 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03560 9 44330225 44342652 Trre9g03560 9 44330225 44342652 ECH