Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03557 ATGGCAGAGGCTTTACTTGAAGTTGCGTTTGAGAATTTGATGTCTCTGCTTCAAAATGAATTGGCCACAATGTTTGGAATCAGGTCAAAGGCTCAAAAGTTATCAACCACCTTGGCTCTGATCAAGGCTGTTCTTGAAGATGCTGAGAAGAAACAAGTCACCGACCGCTCTATTAAGGTATGGCTTCAACAACTCAAAGATGCTGTATATGTGCTCGATGATATCCTTGACGAGTGTTCCATTCAATCTTATCGACTCAAGGGCCCATCCTCTTTCAAACCAAAGAATATCATGTTTCGCCGTGACATTGGTAACAGGTTGAAAGATATTACAAGGAGATTTGATGATATTGCGGAAAGTAAGAATAAATTTCTTCTACGAGAGGGTGTTACTATTATGGAAAGCTCAAGTGAAGTGGCTGAGTGGCGTCAAACCAGCTCCTTTATTGCTGAACCAAAAGTGTATGGACGAGACGATGACAAACAAAAAATTGTCGAGTTTCTTCTCACCCAAGCAATCGATTGTGAATTCCTTTCCGTCTATCCCATAGTTGGGTTAGGCGGTGTTGGAAAAACAACACTTGCTCAATTGGTCTACAACGATCATAAGGTGAGTAGCAATTTTGATACAAAGATTTGGGTTTGTGTTTCCGAAGCTTTCTCGGTCAATAGGATTCTATGTTCCATTATAGAATCTATCACAGGTCAAAAGTCTCATGCCTTGGATTTAGATGTAATACAAAGAAAGGTGCAAGAACTATTGCAAGGTAAACGATTTTTGATAGTTTTAGATGATGTGTGGAACCAAAGTCAAGAACTGGAATTCGGTTTGAGCCAAGAGAAATGGAACAAGTTGAAATCAGCGTTTTCAAGTGGATCCAAAGGTAGTTCTTGTTTAGTTTCCACTCGTGATGAGGTTGTTGCAAAAATCATGGGAACATGCCAACATCATTATTTGTCCGGTCTCTCTGAAAATGAATGTTGGTTGTTATTCAAACAATATGCATTTGGACATGACAGAGAAGAACAAGGACAACTATTGGAAATAGGCAAAGAGATTGCAAAAAAGTGTGCGGGGTTGCCTCTTGCTGCACAAGCATTAGGAGGTTTAATGCGCTCAAGGAGTGGAGAAAAAGAATGGCTTGAAATTAAAGAAAGCACACTTTGGGATTCACCTAGTGACAATTATATTTTGCCAGCCTTGAGATTGAGCTACTCTTATTTGACGCCGACCGTAAAGCAATGTTTCTCTTTTTGTGCTATGTTTCCCAAGGATACAAAAATTTTGAAGGAAGAATTGATTCACCTTTGGATGGCTAATGGATTTATTTCATCTAGGAAAAATTTGGAGGTTGAAGATGTTGGCAGCATGATTTGGAATGAACTGTACCAAAAATCATTCTTTCAAGACATTACGATGGATGAATATTCTGGAAACATTTTTTTCAAGATGCATGATCTTGTCCATGATCTTGCTCAATCAATAATGGGGCAAGAATGTTTGTATTTGGAGCAGGCAAACATGACTAGTTTGTCAAAAAGCACACACCACATAAGTGTTCACTCCGATGACTTGTTTCTAATCGATGAGTGTGCCTTGAAAAAAGTTGAATCCTTGCGAACATTGTTTCATTTGGAGCGATATAACGAAAAAAAACATCATTACTTCCCAACAAGTCCTTCTCTTCGAGTTTTATGCACATCATTTATCAATGTCGTACCATCATTAGGGAGTTTAACTCATTTAAGTTTAGAGGCAGGTAATAGCTTGGCTGAATTAAGTGATCTAAACATCGGTGGAAACTTAAGCATCGAATGCTTAAATAATGTTGGCAGTTTATCTGAAGCTCAAGAAGCCAATTTGATGTGTAAAAAAGACCTCGAAGAATTATGCTTGTCATGGAAAATAAGAAGCGAAGAATTTACAAAGACCCCTGCTATGAATGCTGAGCAACTACTTGAAGTGCTTCAACCTCACTCAAATCTCAAGAGGTTGACAATAAATTTCTATGAAGGATTATTCTTACCAAGTTGGATAAGTATTCTTAGTAATTTAGTATCTCTTCAGCTTTGGAATTGCAAGAATTGTGAGCGGCTACCGTCAATTGGTAAACTACAATCTCTCAAAAGATTGTATTTAACCAATATGGTTAATCTAAAATACTTGGATGATGAATGTCACAATAGCATGGAGGTGAGGGTTTTCCCATCTCTGGAGCAACTCAGGTTACAAGATTTACCAAACTTAGAGGGGTTATTAAAAGTGGAAAGAGGGGAGGTGTTTCCTTGTCTATCTCGTTTGCACATCTACTCATCATGCCCTAAACTTAGACTACCATATTTTCCATCTCTTAAAATCCTCCGTGTATGGGAATGTAACAATGAGTTACTAAGGTCAATCTCTACCTTTTGCAGTCTTACTGATCTTACCGTTTTTGGAGGTGATGAAGGAGTTACATCCTTCCCAGAAGGGATGTTCAGAAACCTTACTTTTCTTCAATCTTTGGAAATAAGTAATTTTCCAAAATTGAAGGAGTTACCAAATGAACCCCTAAGCCAAGCTTTAAAACATCTGGGTATCATTGGCTGCCAGTTTGAGTCTTTACCGGAGGAAATTTGGGAAAGTCTACCATCCCTTCGATCTCTAAGGTTTTATCATTGTGAAGGATTGCGATGTTTTCCGGAGGGTATTCAACATCTCATTTTTCTTAAGGATCTAGATATTTCGAATTGTAATGGATTGCGATGCTTGCCGGAGGGTATTCGACACCTCACTTCTCTTGAGAGTCTGAGAATTCAAGAATGCCCAACATTAAAGGAACGATGCCAGGAGGGAACGGGGGAGGACTGGGACAAGATAGCACATATTCCGAAATTATTCATTCCATAG 2889 0.3866 MAEALLEVAFENLMSLLQNELATMFGIRSKAQKLSTTLALIKAVLEDAEKKQVTDRSIKVWLQQLKDAVYVLDDILDECSIQSYRLKGPSSFKPKNIMFRRDIGNRLKDITRRFDDIAESKNKFLLREGVTIMESSSEVAEWRQTSSFIAEPKVYGRDDDKQKIVEFLLTQAIDCEFLSVYPIVGLGGVGKTTLAQLVYNDHKVSSNFDTKIWVCVSEAFSVNRILCSIIESITGQKSHALDLDVIQRKVQELLQGKRFLIVLDDVWNQSQELEFGLSQEKWNKLKSAFSSGSKGSSCLVSTRDEVVAKIMGTCQHHYLSGLSENECWLLFKQYAFGHDREEQGQLLEIGKEIAKKCAGLPLAAQALGGLMRSRSGEKEWLEIKESTLWDSPSDNYILPALRLSYSYLTPTVKQCFSFCAMFPKDTKILKEELIHLWMANGFISSRKNLEVEDVGSMIWNELYQKSFFQDITMDEYSGNIFFKMHDLVHDLAQSIMGQECLYLEQANMTSLSKSTHHISVHSDDLFLIDECALKKVESLRTLFHLERYNEKKHHYFPTSPSLRVLCTSFINVVPSLGSLTHLSLEAGNSLAELSDLNIGGNLSIECLNNVGSLSEAQEANLMCKKDLEELCLSWKIRSEEFTKTPAMNAEQLLEVLQPHSNLKRLTINFYEGLFLPSWISILSNLVSLQLWNCKNCERLPSIGKLQSLKRLYLTNMVNLKYLDDECHNSMEVRVFPSLEQLRLQDLPNLEGLLKVERGEVFPCLSRLHIYSSCPKLRLPYFPSLKILRVWECNNELLRSISTFCSLTDLTVFGGDEGVTSFPEGMFRNLTFLQSLEISNFPKLKELPNEPLSQALKHLGIIGCQFESLPEEIWESLPSLRSLRFYHCEGLRCFPEGIQHLIFLKDLDISNCNGLRCLPEGIRHLTSLESLRIQECPTLKERCQEGTGEDWDKIAHIPKLFIP 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03557 962 Gene3D Ribonuclease Inhibitor 762 852 IPR032675 -
Trre9g03557 962 Gene3D Ribonuclease Inhibitor 853 946 IPR032675 -
Trre9g03557 962 FunFam Probable disease resistance protein At1g63360 405 494 - -
Trre9g03557 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 419 IPR027417 -
Trre9g03557 962 Gene3D Ribonuclease Inhibitor 499 761 IPR032675 -
Trre9g03557 962 Gene3D - 137 317 IPR027417 -
Trre9g03557 962 CDD RX-CC_like 2 119 IPR038005 -
Trre9g03557 962 Gene3D - 321 409 IPR042197 -
Trre9g03557 962 FunFam Probable disease resistance protein At1g61300 136 316 - -
Trre9g03557 962 SUPERFAMILY L domain-like 483 771 - -
Trre9g03557 962 Pfam NB-ARC domain 158 385 IPR002182 GO:0043531
Trre9g03557 962 PRINTS Disease resistance protein signature 180 195 - -
Trre9g03557 962 PRINTS Disease resistance protein signature 253 267 - -
Trre9g03557 962 PRINTS Disease resistance protein signature 357 371 - -
Trre9g03557 962 PRINTS Disease resistance protein signature 898 914 - -
Trre9g03557 962 Pfam Rx N-terminal domain 6 99 IPR041118 -
Trre9g03557 962 Coils Coil 31 51 - -
Trre9g03557 962 Gene3D - 411 494 IPR036388 -
Trre9g03557 962 PANTHER DISEASE RESISTANCE PROTEIN RP 33 792 IPR044974 GO:0006952
Trre9g03557 962 Gene3D - 6 118 - -
Trre9g03557 962 SUPERFAMILY RNI-like 735 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03557 Trre-Chr9 44293109 44296234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03557 163 889 WRKY Transcription Factor Family AT5G45050 20.909 5.86e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03557 - - mtr:11405813 1137.09