Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03556 ATGCCTTATACCATTGAAGTTGTTAAAAGAACTGGTTGCAAATACAGTGGTATCACTTTGTCAAAGGAGCAACTCAAATTTGCAGAAGAAAGAGTTAAAGATGCTGGCCTTCAGGTTACATTCGTTGGATCTTTCATGGTTAGGAATTTATCCCTTCTAACTCTCAAAGGTGCAAGACCTGGTGGCTTCCCCAGTAGCCAGGTCATTTTACCTCTTGCTCCTACGATCGAGCATGAGGAGTTCCTAAAGGTAGTTCGTATAGAAGGTCATGCATTTTCCCTAGAAGATGTTGCTTTGGCATGTGATATGTATCTTTTGCAGCTCTGCAGTGGAATTGATGAAAGTTCAATTGGAGCTTGTGCTCAACTTGTGTTTGCACCTATTGACGGATCCTTTGCGGATGACGCCCTTTTGGTGGATTAA 423 0.4232 MPYTIEVVKRTGCKYSGITLSKEQLKFAEERVKDAGLQVTFVGSFMVRNLSLLTLKGARPGGFPSSQVILPLAPTIEHEEFLKVVRIEGHAFSLEDVALACDMYLLQLCSGIDESSIGACAQLVFAPIDGSFADDALLVD 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03556 140 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 49 139 IPR044830 GO:0003700
Trre9g03556 140 Gene3D Vaccinia Virus protein VP39 3 51 IPR029063 -
Trre9g03556 140 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 42 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03556 Trre-Chr9 44285128 44287609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03556 58 139 Homeobox Transcription Factor Family AT2G34710 75.610 2.97e-37 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03556 K09338 - gmx:100779499 144.821