Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03515 ATGTTAGATGGTCCTCCGGTTGCTAACGAGAATGACAGTGCTAAGGAAGATGGTGTTAAGAAAAAAAAGGCTGGTACATCAAAGGCTTGGAAATATAAGGTTCTTGTGAAGAAATTGAATTTATATGTGAAACTTGAGGGTCACCAAGGTTGTGTGAATGCAGTTGAATTTAACTCTACTGGTGATGTTATTGTCTCAGCTGAGCAGGTACAGGCATCGGAGAGGGTTTATGCCCAATGCCCTAAGCCGAGCTCTTTGCATCGACAACAACTGATCCGGGAATGCCCCATTTTTGCTAATATTGAGCCGAAGCAGATAAAAAAAGCTATCTGCAAAGAACAAACTAGAGCATGCGGTCTTGTAAGTTCAGAGCTCGCAAAGATCGTGGAGATCCTTAAAGACCGCCCCTGTTGGTTTCGAGATTGTCGGAGCCTTGAAGTGTTCACCATGATCCACACTAGTAATGCAGGTACTATTGAGCTTGTGTACATGCAGACTTATGCCCCAACTACACTGGCTCCTGCACGGGGTTTTGGACTCTTCAATACACAACTATGTTGGAGAATGGTATGTGAAAGATCTCTATCTGGTGCTAGGGCTGCTTCTAATCCAGGTGCAGCATCTCAATTCGTCCGGGCTGAAATGCTTTCATCTGGGCTGAAATAG 666 0.4459 MLDGPPVANENDSAKEDGVKKKKAGTSKAWKYKVLVKKLNLYVKLEGHQGCVNAVEFNSTGDVIVSAEQVQASERVYAQCPKPSSLHRQQLIRECPIFANIEPKQIKKAICKEQTRACGLVSSELAKIVEILKDRPCWFRDCRSLEVFTMIHTSNAGTIELVYMQTYAPTTLAPARGFGLFNTQLCWRMVCERSLSGARAASNPGAASQFVRAEMLSSGLK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03515 221 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 66 107 IPR044830 GO:0003700
Trre9g03515 221 MobiDBLite consensus disorder prediction 1 21 - -
Trre9g03515 221 Gene3D - 63 144 - -
Trre9g03515 221 Pfam START domain 114 220 IPR002913 GO:0008289
Trre9g03515 221 SUPERFAMILY Bet v1-like 114 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03515 Trre-Chr9 43941506 43945106 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03515 116 219 Homeobox Transcription Factor Family AT5G60690 71.296 1.32e-40 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03515 K09338 - han:110927068 140.198