Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03511 ATGTGTGGTGTGCTGAATTTTCAAGACAAGCAAAGACTTGTCCATGAGGTTGCTCGTAAGTCCAAAGATGCCCCAAATATACTTCAAGCATTTACTCGCCGGGAACTCCTAGAATTAATCTGTGCTGAATTAGGAAAAGAAAGGAAGTACACGGGATATACTAAGGATCAGATGATAGAACATCTTCTGAAGTTAGTTTCTAAGAAATCCAACCAGCACGCTGAACAAAATGCTCTTGCTCATTCTCCTGCCAAAAGTTGCATAGGATCTAAACGGAAAAAAGGACTGCCGTCTCCTGATTTACATCATGTTCAAGTAGAGAACACTAATAAGGAAACAATGAAGACCTTAGTGTGTCAGAATGTTGCATGCAAAGCTACGCTGAATCCAGAAGATTCGTTTTGCAAGAGATGTTCTTGTTGTATATGTCGTTGTTACGATGATAACAAGGATCCTAGTCTGTGGTTAACCTGCACCTCTGATAATCCCAATGATGGGTCATGTGGAATGTCATGCCATTTGCAATGTGCTTTGAGTAATCAAATGTCTTGCATTTTGAAGGGAAGTTGCGGTAAAACCTTGGATGGAAGCTTCTATTGTGTTTCTTGTCGAAAAATTAATGACTTAATGAGGACATGGCGAAAGCAATTATTGGTTGCCAAAGAAGCAAGAAGAGTTGACATACTCTCTTTGCGAATATCCTTGGCTCACAGAATTCTCATAGGAACAAAAGTGTACAAGGAAGTGCAAAGGATTGTAGAAACTGCTCTCAAATTACTGGAGAATGAAGTGGGACCTCTGGATCATGTATATGCCAGGATGACGCGTGGGATTGTGAGCAGACTCTCATGTGGTGCTGAGGTTCAGAAGTTGTGCTCTACTGCAATTGAATGTTTTGATTTGAAGTTTTCTGAACTCTTTTCTAGCTGTGCAGAAAAGAAAGAAGCACCAACATGCTCTTTACATTTTGAAGAGTGTCTTCCTACCTCAGTGGTCATTGTGCTTGAATACAAAGACAAACTTTTAAAGAACTTTCTAGGTTGCAGGCTTTGGCACGGAAAATCAACAATGGACTATCCAGAACAACCCACTTTCATTGTTTTGAGGCCCGAGAAAAGATTCAAGTTAGAAAACCTCACACCTTCAACTGAGTACTCTTGCAAAGCTTCTATATTCAGCAGCACAGGGATTTTGGGTGCAGCAGAAGCTAAATGGATGACGCCCTGTCAACCACCTTCAAAAACTATTCGACATATTGCAAACCATACAACTATTAACACATGTGCACAAAACCAATCAACTATCAGGGACAGGTTTGAAGAGTTCCTCAGCAAGCCCCCGACGATAGAACCTTTTTCATATAAAAGTTTTGCAGCGGTTCCACCTGCCACACCTTCTAAATCCAATGAAATGAGACAACTTACTGGTTTGAATTGTAGAAAGCGCGTGAAAGAAAATGATTACGAGTATTCTGTGAGGGTAGTCAAATGGTTAGAGCATCGAGGGCACATAGACGAAATCTTTAGAGTGAAGTTTCTGACATGGTTCAGTCTCAAGGCTAATCAGCAAGAGAGAAGGGTGGTTAGTGCTTTTATTGATGCATTAATTGATGACCCTGCAAGCTTAGCAGACCAGCTAATACACACTTTCACCGATGAAATTTGTTGCGACCAAAAATCTTAG 1683 0.407 MCGVLNFQDKQRLVHEVARKSKDAPNILQAFTRRELLELICAELGKERKYTGYTKDQMIEHLLKLVSKKSNQHAEQNALAHSPAKSCIGSKRKKGLPSPDLHHVQVENTNKETMKTLVCQNVACKATLNPEDSFCKRCSCCICRCYDDNKDPSLWLTCTSDNPNDGSCGMSCHLQCALSNQMSCILKGSCGKTLDGSFYCVSCRKINDLMRTWRKQLLVAKEARRVDILSLRISLAHRILIGTKVYKEVQRIVETALKLLENEVGPLDHVYARMTRGIVSRLSCGAEVQKLCSTAIECFDLKFSELFSSCAEKKEAPTCSLHFEECLPTSVVIVLEYKDKLLKNFLGCRLWHGKSTMDYPEQPTFIVLRPEKRFKLENLTPSTEYSCKASIFSSTGILGAAEAKWMTPCQPPSKTIRHIANHTTINTCAQNQSTIRDRFEEFLSKPPTIEPFSYKSFAAVPPATPSKSNEMRQLTGLNCRKRVKENDYEYSVRVVKWLEHRGHIDEIFRVKFLTWFSLKANQQERRVVSAFIDALIDDPASLADQLIHTFTDEICCDQKS 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03511 560 MobiDBLite consensus disorder prediction 79 100 - -
Trre9g03511 560 Pfam PHD - plant homeodomain finger protein 119 238 IPR032881 -
Trre9g03511 560 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 432 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03511 Trre-Chr9 43886541 43889099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03511 2 506 PHD Gene Family AT4G30200 34.124 1.21e-81 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03511 - - gmx:100785502 886.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03511 9 43886541 43889099 Trre9g03511 9 43886541 43889099 ECH