Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03510 ATGGAGAGAAAACTCTCTTCTAACAACAACACCTTCAAAAAGACTTTGCAAATAACACAAGAGAGCAAAAATCAAAATAAGAACAAATCTTCTTTCAGCGAGCAAGAGTCTCTTGTTCTATTACAAAAGTACGACGCGAGCACATTGTTGAAATTGTTGCAAGAAGTGGCGAGTCATGATCGTTGGAAGATTAATTGGAATGAGTTGGTGAAGAAAACTTCGACGGGTATTTTGAGTGCGAAAGAGTATCAAATGTTGTGGCGTCATTTGGCCTATGGTCATTCCTTGATTGATGCTGATTTTGAAGATGATGATCTACCTTTGGATGATGATAGTGACTTGGAATATGAAAGGGAAACGTTACCATCCATACCCAAACAAACTGCTTTGCAAGCTGCAGCATGTGTCCAGGTAATAATATCTTCTGTTTCAATGAGTCAATGTACCCCAACTAGCTCAACAATTGAAGCTCCTTTGAATATACATGTTCCATCACCATCACATGCTTCATGTAGCACAAGTTCACAACCTTGTAATAATTTGATACAAGAGCCAAACATTATTTTTCCAGTAATTGTTGAGAGACAAACAAGGCTAAATAATATTAATAATGTATCTTCAACAACAAAATATATACAAAACAATGGATTAGTTGGTCACATTACATCAAATATTCAAAGGAAAAGAAAAGGATGGACAAAGGAAGAGGATATGCAACTACAAGATGCTGTTAAGAAATGGGGTGAAGGGAATTGGACAGACATTGCTGGAAGAGATGACTTTACTCTTGATAAAACTGCTGCACAATTGTCTAAGAGATGGAGAATATTACGAAATAAAGTTGGTGGAAATAATTGA 858 0.3613 MERKLSSNNNTFKKTLQITQESKNQNKNKSSFSEQESLVLLQKYDASTLLKLLQEVASHDRWKINWNELVKKTSTGILSAKEYQMLWRHLAYGHSLIDADFEDDDLPLDDDSDLEYERETLPSIPKQTALQAAACVQVIISSVSMSQCTPTSSTIEAPLNIHVPSPSHASCSTSSQPCNNLIQEPNIIFPVIVERQTRLNNINNVSSTTKYIQNNGLVGHITSNIQRKRKGWTKEEDMQLQDAVKKWGEGNWTDIAGRDDFTLDKTAAQLSKRWRILRNKVGGNN 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03510 285 CDD SANT_TRF 232 279 - -
Trre9g03510 285 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 224 282 IPR017930 -
Trre9g03510 285 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 23 282 - -
Trre9g03510 285 MobiDBLite consensus disorder prediction 8 30 - -
Trre9g03510 285 Gene3D - 222 282 - -
Trre9g03510 285 SMART sant 228 280 IPR001005 -
Trre9g03510 285 ProSiteProfiles Myb-like domain profile. 224 278 IPR001005 -
Trre9g03510 285 Pfam Myb-like DNA-binding domain 229 275 IPR001005 -
Trre9g03510 285 MobiDBLite consensus disorder prediction 1 30 - -
Trre9g03510 285 SUPERFAMILY Homeodomain-like 227 278 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03510 Trre-Chr9 43877773 43881272 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trre9g03510 Myb_DNA-binding 9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03510 - - tpra:123920135 464.151