Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre9g03510 | ATGGAGAGAAAACTCTCTTCTAACAACAACACCTTCAAAAAGACTTTGCAAATAACACAAGAGAGCAAAAATCAAAATAAGAACAAATCTTCTTTCAGCGAGCAAGAGTCTCTTGTTCTATTACAAAAGTACGACGCGAGCACATTGTTGAAATTGTTGCAAGAAGTGGCGAGTCATGATCGTTGGAAGATTAATTGGAATGAGTTGGTGAAGAAAACTTCGACGGGTATTTTGAGTGCGAAAGAGTATCAAATGTTGTGGCGTCATTTGGCCTATGGTCATTCCTTGATTGATGCTGATTTTGAAGATGATGATCTACCTTTGGATGATGATAGTGACTTGGAATATGAAAGGGAAACGTTACCATCCATACCCAAACAAACTGCTTTGCAAGCTGCAGCATGTGTCCAGGTAATAATATCTTCTGTTTCAATGAGTCAATGTACCCCAACTAGCTCAACAATTGAAGCTCCTTTGAATATACATGTTCCATCACCATCACATGCTTCATGTAGCACAAGTTCACAACCTTGTAATAATTTGATACAAGAGCCAAACATTATTTTTCCAGTAATTGTTGAGAGACAAACAAGGCTAAATAATATTAATAATGTATCTTCAACAACAAAATATATACAAAACAATGGATTAGTTGGTCACATTACATCAAATATTCAAAGGAAAAGAAAAGGATGGACAAAGGAAGAGGATATGCAACTACAAGATGCTGTTAAGAAATGGGGTGAAGGGAATTGGACAGACATTGCTGGAAGAGATGACTTTACTCTTGATAAAACTGCTGCACAATTGTCTAAGAGATGGAGAATATTACGAAATAAAGTTGGTGGAAATAATTGA | 858 | 0.3613 | MERKLSSNNNTFKKTLQITQESKNQNKNKSSFSEQESLVLLQKYDASTLLKLLQEVASHDRWKINWNELVKKTSTGILSAKEYQMLWRHLAYGHSLIDADFEDDDLPLDDDSDLEYERETLPSIPKQTALQAAACVQVIISSVSMSQCTPTSSTIEAPLNIHVPSPSHASCSTSSQPCNNLIQEPNIIFPVIVERQTRLNNINNVSSTTKYIQNNGLVGHITSNIQRKRKGWTKEEDMQLQDAVKKWGEGNWTDIAGRDDFTLDKTAAQLSKRWRILRNKVGGNN | 285 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre9g03510 | 285 | CDD | SANT_TRF | 232 | 279 | - | - | |
Trre9g03510 | 285 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 224 | 282 | IPR017930 | - | |
Trre9g03510 | 285 | PANTHER | HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN | 23 | 282 | - | - | |
Trre9g03510 | 285 | MobiDBLite | consensus disorder prediction | 8 | 30 | - | - | |
Trre9g03510 | 285 | Gene3D | - | 222 | 282 | - | - | |
Trre9g03510 | 285 | SMART | sant | 228 | 280 | IPR001005 | - | |
Trre9g03510 | 285 | ProSiteProfiles | Myb-like domain profile. | 224 | 278 | IPR001005 | - | |
Trre9g03510 | 285 | Pfam | Myb-like DNA-binding domain | 229 | 275 | IPR001005 | - | |
Trre9g03510 | 285 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Trre9g03510 | 285 | SUPERFAMILY | Homeodomain-like | 227 | 278 | IPR009057 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre9g03510 | Trre-Chr9 | 43877773 | 43881272 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Trre9g03510 | Myb_DNA-binding | 9e-08 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre9g03510 | - | - | tpra:123920135 | 464.151 |