Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03507 ATGGGCCGTGCAAAAATACCTATGAAATACATTCAAACGGAGAAATCTCGCAAACTAGCTTTCAATCAGAGAACAAATGGATTAAGGAATAAAATTTTCAAATTTTCTAAGTCTGGAGCAAAAGTTTGCTTAATTTTGTACAATGATGATGATAATAATGTTGGACCAATGACATGGCCAGAAGACCCTACTAGTGTAAACTCCATGCTTCAAGAATACGAGCATCAAAAGATCGAAACACCTCCAAAAATATTCGATGTCAAAGACTACTTTGAAAATAAAAAATGTAAAGCTGAAGTTGCGATTATCAAAGTGCGCAAAGAAATCCTCAAGAAGAAGTATCCAACTTGGCATCCAAATTTCAATAACATGGAAGAGAATAATCTCATTTCTTTCATTACTATTATAGAGAAAAAGATTCAAGTTTGTAATGAAAAAATTCACATGCTGAAAAATGTGCAAGAAAGTGAAACTAATTTCTTGCAAAGCACTCCTCATGTGGAAATTATGGTTCAAGAGGGTGTTACCGTACCTCAAATGCAACGTTGTGAAAATTCGCAGGAAAAGCCTTGGGAATACCTACAGATTCCTACTCCTATGAAGTCAACTGATGATATTAATGAGATGACGGATTTCACCAATCTTGTTGATTTGCCTCCTAGTTCATCAACAAAGCAACTTGGTGAAGTTGTGAATTGTGGTAATGAAGTGGTTAATCATGATGACTACTTGGCTACTCAATTTGCTGATACTAATGATTGGATTAATCAACTTGATCCTGATATTTTGAACTGGGCTAGTCAACCAAAGGAGTTTTCTTGGAAAGATTTTTCAATTTAG 840 0.3476 MGRAKIPMKYIQTEKSRKLAFNQRTNGLRNKIFKFSKSGAKVCLILYNDDDNNVGPMTWPEDPTSVNSMLQEYEHQKIETPPKIFDVKDYFENKKCKAEVAIIKVRKEILKKKYPTWHPNFNNMEENNLISFITIIEKKIQVCNEKIHMLKNVQESETNFLQSTPHVEIMVQEGVTVPQMQRCENSQEKPWEYLQIPTPMKSTDDINEMTDFTNLVDLPPSSSTKQLGEVVNCGNEVVNHDDYLATQFADTNDWINQLDPDILNWASQPKEFSWKDFSI 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03507 279 SUPERFAMILY SRF-like 1 76 IPR036879 GO:0003677|GO:0046983
Trre9g03507 279 ProSiteProfiles MADS-box domain profile. 1 36 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03507 Trre-Chr9 43859628 43860467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03507 1 141 Type I MADS-box Gene Family AT5G55690 28.767 1.44e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03507 - - tpra:123886171 307.375