Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03496 ATGATTTCTCAACCAATCTTATTAGCTTTGATTCTATTCCTCCTTGCTTTCCTTCTCCAACATTTTTTGTTTAAAAGAAACAACAAATCAAAGGAGCATTTCCCTTACCCTCCAAGTCCACCAGCAATACCAATAATTGACCATCTTCATCTTGTCAAACCACTCATTCATCAAGCCTTTCGAGATCTATCCGATCGATATGGCCCTCTTATATCCCTTCGACTTGGCTCCGTTCAATTTATCGTTGTTAATACGCCATCACTCGCTAAAGAGTTTCTCAAAACAAACGAACTCGTTTATTCTTCGCGTAAAAAAAACATTGCCATCAACTTGGTTACCTATGATGACGCTACTTTTGCTTTTGCCCCTTATGGGACATATTGGAAGTTCATTAAAAAGGTCAGCACCTTTGAGCTCTTAGGCAACCGAACCATCGCACAATTTTTACCAATTCGAACCCGAGAACTTCATGAATTCATTCAAACTTTGGCAAATAAATCCAAGGCCGAAGAGAGCGTGAACCTCACACAAGCTTTGTTGAAGTTATCCAACAATATAATATCACAGATGATGTTGAGCATTGAGACCTCGGGAACGGATAGTCAAGCTGAACAGGCGAGGACGTTGGTTCGCGAGGTGACACAAACTTTCGGGGAATTTAACGTTTCAGATTTTATAGGATTTTGCAAGAAGATGGACTTGCAAGGTCTCAAAAAGAGGGCATTGGATATACATAAGAGGTATGATGCCTTTTTAGAGAAACTCATATGTGATCGCGAGGAATCAAGAAGGAAAGTCAAGGTTGAGGGTGGTTTTGTGGATGAAGAGAAAGTGAAGGACTTTCTTGATATTTTGCTTGATGTTTCTGAGGCCAAAGATTGTGAAGTTGACTTTACTAGGAACCATATCAAATCATTGATCTTGGATTACTTTACAGCAGCTACAGACACTACTGCCATTTCATTGGAATGGGCAATAGCAGAATTGTACAACAATCCAATGGTGTTGAAGAAAGCGCAAGAGGAGGTGGAGAAAGTAATAGGGAAGGAAAGACTAGTATCTGAAGCAGACATTTCAAATCTTCCTTATACAAATGCAATTATAAAAGAAACATTAAGACTTCACCCGCCACTACCGATGATAGCTAGGAAAGGAACACAAGATTGTGTCGTCGATGAGAAAATGATTCCAAAAGGCTCGATAGTTTGCGTGAACATTTGGGCCATGGGAAGGGACCCAAAGATCTGGAAAAACCCATTGGAGTTTAAACCTGAAAGGTTTTTGGAATCTGGCATAGAGAGTGATATAGATATCAAAGGGCATCACTTTGAATTGTTGCCATTTGGTTCGGGAAGGAGAGGTTGTCCGGGGATGCCTTTGGCGATGCGTCAATTGCCCACCGTAATTGGAGCTTTGATACAATGCTTTGAGTGGAAGATGCTTGATTCTGAAAACAAAATCTTAAATCAAGGCAAAACAATACATATGGAAGAGCGGCCAGGATTGACCGCTCCTCGAGCCAATGAACTTTTTTGCATTCCAGTTGCAAGATTGAATCGTGTTCCTTGTCTTCAAGTGTAG 1581 0.4061 MISQPILLALILFLLAFLLQHFLFKRNNKSKEHFPYPPSPPAIPIIDHLHLVKPLIHQAFRDLSDRYGPLISLRLGSVQFIVVNTPSLAKEFLKTNELVYSSRKKNIAINLVTYDDATFAFAPYGTYWKFIKKVSTFELLGNRTIAQFLPIRTRELHEFIQTLANKSKAEESVNLTQALLKLSNNIISQMMLSIETSGTDSQAEQARTLVREVTQTFGEFNVSDFIGFCKKMDLQGLKKRALDIHKRYDAFLEKLICDREESRRKVKVEGGFVDEEKVKDFLDILLDVSEAKDCEVDFTRNHIKSLILDYFTAATDTTAISLEWAIAELYNNPMVLKKAQEEVEKVIGKERLVSEADISNLPYTNAIIKETLRLHPPLPMIARKGTQDCVVDEKMIPKGSIVCVNIWAMGRDPKIWKNPLEFKPERFLESGIESDIDIKGHHFELLPFGSGRRGCPGMPLAMRQLPTVIGALIQCFEWKMLDSENKILNQGKTIHMEERPGLTAPRANELFCIPVARLNRVPCLQV 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03496 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Trre9g03496 526 PANTHER STEROID 21-HYDROXYLASE-RELATED 14 507 - -
Trre9g03496 526 SUPERFAMILY Cytochrome P450 37 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 FunFam Cytochrome P450 family protein 28 512 - -
Trre9g03496 526 Pfam Cytochrome P450 37 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 Gene3D Cytochrome P450 21 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre9g03496 526 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03496 Trre-Chr9 43771053 43774343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03496 28 517 Cytochrome P450 AT5G06900 40.650 3.53e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03496 K23179 - gmx:100783503 781.171