Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03470 ATGCGAGAAAATTGTGGAACCTGGACACCCCAGGTGCAATTTAATTTGCAATCACCCAATTTGAATTCTTTCTGTGCTCCCTTTGATATGGGGAAGCAAAATGCTGCTGCATCTGCAGCGATGAACCCGGGTGTCGATATGAATACGATTTCTAGGAATGAGGCCTTACCAACTTATGAATCCTCTGCATTACCTCATATGCAGTTAGGAAATTGTAATGAACCTCATGGTTGGTTTTATTGTTTGCCTCGATTTCGACAGGGTTTTACGTGTCCTCCAAACTTCACTTCCGAGGAAAAACTCCCTCAGCCTAGTCATTTGAAGGGTTTTAAGGAGGAAATTGCTCCCAATGGGGAATTAGGATTTCCTCAGAAGCAATTCCTCGTCATTGATCAAACGGGCGATCAAACAACTCTCATTTATAGTTCAAGATTTGGGAGCCCTGCTGAGTGCCTCGGTTCCTGGGATTCAAAATTGCATGGTTGTAACAATTTTAACGGGAATAATGAACCTTCTTTAAGAAGAGACGTGAATCATGTGGTTGGACTTGGATTTGGACCGACTTTTGATTATAAAGGGGATGAAAACGATAATCATCAAGGAACTGAGATTGAAAGCGAGATGCACGAAGACACAGAGGAGATCAATGCATTGCTTTACTCAGACAGCGATGCTGATGGTTATTCTACCGAGGATGATGAAGTTACTAGCACTGGGCATTCGCCCAGTACAATGACCACTCATGATAACCAGGAACCTTTCCGAATAGGAACAATTGCCGAAGAAGTTGCTAGCTCCTCCCCTGGAAAAACAAAGAAACGTAAGCTATTCGATGTGGCTTATGATCATGATGATGTGCAGTTTACAGACACTGCAAATTCTCTAAAACAAAAGCGTCGCTTCGACCACACTGGATATAACGACGACGATGCAGAATCAAGATGCTCTGGCAGCAATTACGGTCGAGGGTCATTTGAAATGGATTCCTTAGCAGGCACTAAGAAGATGAGAAAGGAAAAGATTCAAGATGTTCTAAGCATTTTGCAGTGCATAGTTCCTAATGGAAAGGACAAGGAACCAGTCCAGCTTCTTGATGAAGCCATACATTGCTTGAAATCTTTGAAACTCAAGGCGAAAGCTCTCGGACTCAAAGCCTTGTAA 1161 0.4281 MRENCGTWTPQVQFNLQSPNLNSFCAPFDMGKQNAAASAAMNPGVDMNTISRNEALPTYESSALPHMQLGNCNEPHGWFYCLPRFRQGFTCPPNFTSEEKLPQPSHLKGFKEEIAPNGELGFPQKQFLVIDQTGDQTTLIYSSRFGSPAECLGSWDSKLHGCNNFNGNNEPSLRRDVNHVVGLGFGPTFDYKGDENDNHQGTEIESEMHEDTEEINALLYSDSDADGYSTEDDEVTSTGHSPSTMTTHDNQEPFRIGTIAEEVASSSPGKTKKRKLFDVAYDHDDVQFTDTANSLKQKRRFDHTGYNDDDAESRCSGSNYGRGSFEMDSLAGTKKMRKEKIQDVLSILQCIVPNGKDKEPVQLLDEAIHCLKSLKLKAKALGLKAL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03470 386 PANTHER TRANSCRIPTION FACTOR BHLH145 8 384 IPR037546 -
Trre9g03470 386 MobiDBLite consensus disorder prediction 232 250 - -
Trre9g03470 386 MobiDBLite consensus disorder prediction 226 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03470 Trre-Chr9 43511461 43512621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03470 77 379 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 30.693 9.61e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03470 - - tpra:123920090 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03470 9 43511461 43512621 Trre9g03470 9 43511461 43512621 ECH