Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03383 ATGGTTCCAAGTGAGATCAGAGGAGTCAATTATTTACCTCCTCTTGAAAATTCATACCAAATTCCACAAAACTTTGTCTTACCACAAAATGAAATTCCAAACTTCCATCTAAATAATCTCTTAACTAGCTTACCAACAAATTATCATTATCCATCAGTAGGCCATGAATTTGCACCTCCTTCATGTCTCAGCAGCAACTCAACAACTTCTGATGAAGCAGATGAACTTCAATTCAATATCATCGACGAAAGGAAGCACCGACGAATGATATCAAATAGAGAATCAGCTAGGAGATCAAGGATGAGGAAACAAAAACATTTAGATGAACTTTGGTCACAAGTTGTAAGACTTAGAACTGAAAATAACAACCTTGTTGACAAACTTAATCATGTTTCTAAGTCACATGATAAAATTGTTCAAGAGAATGCACGTCTCAAGGAAGAAACTTTTGATCTTCGCCAAATGGTAGCTGATATGCAAATTGTTGTAGTTGCGTGGTGA 501 0.3593 MVPSEIRGVNYLPPLENSYQIPQNFVLPQNEIPNFHLNNLLTSLPTNYHYPSVGHEFAPPSCLSSNSTTSDEADELQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENNNLVDKLNHVSKSHDKIVQENARLKEETFDLRQMVADMQIVVVAW 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03383 166 SUPERFAMILY Leucine zipper domain 84 133 IPR046347 GO:0003700|GO:0006355
Trre9g03383 166 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 161 IPR044521 -
Trre9g03383 166 FunFam BZIP transcription factor 82 133 - -
Trre9g03383 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Trre9g03383 166 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Trre9g03383 166 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Trre9g03383 166 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Trre9g03383 166 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Trre9g03383 166 Gene3D - 82 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03383 Trre-Chr9 42510826 42513026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03383 42 161 bZIP Transcription Factor Family AT3G30530 63.281 3.11e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre9g03383 bZIP_1 4.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03383 - - gmx:100778078 244.973