Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03382 ATGGAATTCTCTAACCAGTTCAAAGAATCATTTAGGTATGGTCTTATTGCTGGGTATTGTTTCACTGCAACTTTTGCCATAGTTTTTTATTTGTCCTATTTTCTACCCACACAACTTATCAAGATGTTGAAAATTAAGGCCATTGGACATAGGAAAACAGTAAAGATAAGCAAATTGCCTGTTCAAGACTTCAGACATGAAAAGATCAAAGAGAAACCAAAGAAAGTTAGACAAAAAGCCAAAATCATGCCTATGGAGTTGCTAGACAAAAGAATACAGATCAATAAAGTTGGAAGATTGAGTTATAGAATGGACTTCACAAAACTCTGTCATGCAACAGAAAACTTTAGCATGAACAATGTCATTGGATTTGGAGTAACTGGTATAATGTACAAGGCAACTCTTCCAAATGGTTGTTTCTTGGCGGTTAAGAAACTATATGATTCTCAATTGTCTATCAAAAGATTTGAGTTAGAAATAATGATTTTGGGACAATACAATCATAGAAACATAGTTCCTTTGATTGGTTTTTGTATAGAAGAAGGAAAAACTGAATTTTATTTGGTGTATCAATATATGTCAAATGGAAAACTTTCTGATAGATTGAATGAAACTACAAAATTAAGATGGAAAATGGTTATTAAAATTGCACTTGGAGTTGCAAGAGGTTTATGTTGCCTCCATCATAGCTTGCATATGGTTCATCTCAATATAAATTCTGATTGTATCTTGCTAGGGAAAAATTTTGAGCCAAAAATATCCAATTTTGGAGGAGCCATGTTTATGAATAATGATTTGAACAAAGACATAGGACTTGACAAGAAGGATGTTTTTGACTTTGGTTGTTTGGTTTTTGAGATGATTAATGGGAAGAAATTTGGCCAAATATGTGAATATTTAAGCAATACTAATGTTCCTTTATGTGAATATAATCATGTAAATATGTTGGAGGATGACCCTTCAAGATTTTGTGATGCAGTTGATGAATATTTAAACAAGATAGAATTTGAAGATGAGGTATATACTCTTGTTAAAGTTGCACGTGAATGTGTTCAACCTTTATCTGAAAAAAGGCCTTCTATGTTTGAGGTTTACAACAAGATATGTAACATATGGGAGAAAGATAGAATTTGTGAAAATCATGACTTCTAA 1152 0.3194 MEFSNQFKESFRYGLIAGYCFTATFAIVFYLSYFLPTQLIKMLKIKAIGHRKTVKISKLPVQDFRHEKIKEKPKKVRQKAKIMPMELLDKRIQINKVGRLSYRMDFTKLCHATENFSMNNVIGFGVTGIMYKATLPNGCFLAVKKLYDSQLSIKRFELEIMILGQYNHRNIVPLIGFCIEEGKTEFYLVYQYMSNGKLSDRLNETTKLRWKMVIKIALGVARGLCCLHHSLHMVHLNINSDCILLGKNFEPKISNFGGAMFMNNDLNKDIGLDKKDVFDFGCLVFEMINGKKFGQICEYLSNTNVPLCEYNHVNMLEDDPSRFCDAVDEYLNKIEFEDEVYTLVKVARECVQPLSEKRPSMFEVYNKICNIWEKDRICENHDF 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03382 383 Gene3D Phosphorylase Kinase; domain 1 75 192 - -
Trre9g03382 383 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 95 373 - -
Trre9g03382 383 Gene3D Transferase(Phosphotransferase) domain 1 273 382 - -
Trre9g03382 383 Gene3D Transferase(Phosphotransferase) domain 1 193 272 - -
Trre9g03382 383 Pfam Protein kinase domain 118 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03382 383 SUPERFAMILY Protein kinase-like (PK-like) 100 366 IPR011009 -
Trre9g03382 383 ProSiteProfiles Protein kinase domain profile. 116 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03382 Trre-Chr9 42478418 42481754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03382 90 374 Receptor kinase-like Gene Family AT1G69990 28.990 1.40e-36 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre9g03382 Pkinase 1.9e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03382 - - tpra:123911597 670.233