Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03336 ATGAGGAGGAGGAAGTTACATCTAAGCAAGATATATTCGTTTGTGTGTGGGAGACCATCATTTAAAGGCAGAGAACATTTACAAATTGGAGAACGTGGATATTCAAGGGTTGTGTTCTGCAATGAACCAGAGAGCTATGAAGAAGGAATTAAAAAGAGAGTAGCTAATTTCTATTTTTTGGTAACCGGTTCTTTGGCCTTCACAAATCTTGCTCCTTATACAACCGTTAGTGCCATCCTTCCTTTAGTTATTGTTATTGGTGCTACTATGGTCAAAGAGGGTATTGAAGATTGGCGTCGCAAAAAACAGGATATTGAGGTGAACAATAGAAGAGTTAAAGTGCATCAAGGGCATGGAACATTTGAATATACTGGGTGGAAGAATTTGAAGGTGGGGCATATAGTGAAGATAATGAAGGATGAATTCTTCCCTGCAGACCTTATACTTGTTTCATCAAGTTATGAGGATGCAGTTTGTTATGTTGAGACAATGAACTTGGATGGAGAGACAAATTTGAAGTTAAAACAAGGATTGGAAGTAATGGCTTCTTTACATGAAGACTTTAACTTCAGTGATTTTAGAGTTTCAATCAAATGTGAAGATCCAAATGCAAATTTATATTCATTTGTTGGTAGTATGGAGTTTAAAGATCAACATTATCCCTTATCTCCTCAGCAACTTCTTCTCAGAGACTCTAAACTTCGTAATACAGACTACATATTTGGTGTTGTCGTCTTCACTGGTCATGACACAAAGGTCATCCAAAATTCCACGGACCCCCCTTCAAAGAGAAGCAAAGTTGAAAAGAAGATGGATAAGATTATCTACTTATTGTTTTGTATTTTATTTTTTATGGCAGCTATTGGATCTGTTTTCTTTGGAATTACAACTAGAGAAGACTTGGATGACGACGATGTAATGAAAAGATGGTATCTAAGACCAGACGATTCTACAATTTTCTTTGATCCAAAAAAGGCTTCTGCTGCTGCTATGTTTCATTTTTTGACAGTCTTAATGTTATATGGCTTCTTCATTCCAATCTCATTGTATGTTTCAATAGAAATTGTCAAAGTTCTTCAAAGCATCTTCATCAATCAAGATATACATATGTACTACGCCGAAGCAGATAAACCGGCCTATGCGCGTACTTCAAACTTGAATGAAGAACTTGGACAAGTTGACACAGTACTTTCAGATAAAACTGGAACACTCACTTGCAACTCAATGGAGTTTCTTAAATGTTCCATTGCTGGAGTAGCTTATGGTCGTGGTGTTACAGAGGTCGAGAGGGTCATGAATAGAAGGAATGATTCTCCTTTGATTAACGACATCAGGGATTCTCCCATTTTAAATGAACCCTTGCCCATTAAAGGTTTTAACTTTATAGATGAAAGGATAATGAATGGAAACTGGGTGAATGAACCTTATGCAGATATTATCCAAAAGTTTTTTCGCTTATTGGCAATTTGTCATACAGCCATACCAGAAGTGGATGATGATACAGGAAATGTCTTGTATGAGGCTGAATCTCCAGATGAAGCGGCATTTGTGATTGCGGCAAGAGAATTTGGTTTTGTATTCTATAAAAGGACTCAAACCAGTTTATCGATGTATGAAATTGATCCAGTTTCTGGTGAAAAGGTTGAAAGGATTTACACACTTCTGAATGTGTTAGAATTCAATAGCACAAGAAAGCGAATGTCAGTAATAGTGAAAGATGAAGAAGGGAGAATTTTGTTGATGTGTAAAGGTGCAGACAGTGTCATGTTTGAAAGACTTGCCAAGAATGGAAGGGAATATGAAGAAAAAACCTTGGAAGATGTGCATGAATATGCGGATGCAGGTCTAAGGACCCTGATATTGGCATACCGTGAACTTGACGAAGAGCAATACAAGAAGTTTGATAATGAATTTTCCCAAGCAAAAATCTCAATTACTGCAAATCGGGAAACATTGTTAGATGAATTATCAGATATGATTGAGAGTAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAATGGGGTTCCTGATTGCATTGACAAACTTGCACAAGCAGGAATTAAGATATGGGTTCTCACTGGTGATAAAATGGAGACTGCCATCAATATTGGATTTGCATGTAGTTTGCTTAGACAAGGAATGAAGCAGCTTATAATTCAGTTGGAGAGTCCAGAAATTAAAGCATTGGAGAAAGCCGGAGACAAAAGTGCGATTGAAAAGGCTTCAAGGGAAAATATTCGACATCAAATATCTGAAGGTGTTCGACAACTTGTTGCCTCTAGAGGAACATCTGAGGAAGCATTTGCTCTAATTATTGATGGAAAATCACTTGCGTATGCTTTAGAGGATAATACAATAGACATGTTTCTTGATCTTGCAATTCGGTGTGCATCAGTTATCTGCTGTCGATCATCTCCTAAGCAGAAAGCACTAGTTGCTAGACTTGTCAAGTTCGGAACTGGTAAAACTACATTAGCTATTGGCGATGGAGCTAATGATGTTGGAATGCTTCAAGAAGCAGATATAGGGGTTGGAATCAGTGGCGTTGAAGGAATGCAAGCAGTTATGTCTAGTGATATTGCAATCGCACAGTTCCATTATTTGGAAAGGTTACTTCTTGTACACGGACATTGGTGTTACCGGAGGATCTCATCAATGATATGCTACTTTTTCTATAAGAATATCACATTTGGCTTTACTGTTTTCTTGTATGAAGTGTGTGCATCATTCTCTGGACAACCAGCATACAATGACTGGTTTTTGTCTCTATATAATGTCTTTTTTTCATCACTTCCTGTGATTGCCCTCGGAGTTTTTGATCAAGATGTATCTGCTCGGTATTGTCTGAAATTTCCTATATTATATCAAGAAGGTGTGCAAAATGTTCTATTTAACTGGATGAGTATACTTAGTTGGATGCTTAATGGCTTTATCAGTGCCATAATGATATTCTTTTTCTGCACAAAGGCAATGGAAATGCAAGCCTTTGTTAAGGAAGGTAGAATTATTGAGAGGGATATACTTGGAGCAACTATGTATACATGTGTGGTTTGGGTTGTGAACTTGCAAATGGCACTTGCCATAAGTTACTTCACCTTGATTCAACATATTTTCATATGGGGAACCATTGCATTATGGTACATTTTCCTCATAGTTTACGGCGCAATTCCTCCTGGAATTTCCACAAATGCTTACAAAGTCTTCATTGAAACTCTAGCACCATCTCCTTCGTATTGGATTTTGACATTGTTTGTGGTCATCTCAACACTCATACCATACTTCTCTTACTCAGCAATCAAGATGCAGTTCTTTCCTTTTTATCATGAGATGGTACAATGGATAAGGTATGAAGGGAAGGCAAATGATCCTGAATTCTGCCATATGGTGCGCCAACGATCCTTGCGTCCAACCACTGTCGGTTCAACAGCTCGCTTAGCATCTAAGACTAACAGCGTCAGAGAGAATTCTACTAACCAAAGATAA 3498 0.3785 MRRRKLHLSKIYSFVCGRPSFKGREHLQIGERGYSRVVFCNEPESYEEGIKKRVANFYFLVTGSLAFTNLAPYTTVSAILPLVIVIGATMVKEGIEDWRRKKQDIEVNNRRVKVHQGHGTFEYTGWKNLKVGHIVKIMKDEFFPADLILVSSSYEDAVCYVETMNLDGETNLKLKQGLEVMASLHEDFNFSDFRVSIKCEDPNANLYSFVGSMEFKDQHYPLSPQQLLLRDSKLRNTDYIFGVVVFTGHDTKVIQNSTDPPSKRSKVEKKMDKIIYLLFCILFFMAAIGSVFFGITTREDLDDDDVMKRWYLRPDDSTIFFDPKKASAAAMFHFLTVLMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYAEADKPAYARTSNLNEELGQVDTVLSDKTGTLTCNSMEFLKCSIAGVAYGRGVTEVERVMNRRNDSPLINDIRDSPILNEPLPIKGFNFIDERIMNGNWVNEPYADIIQKFFRLLAICHTAIPEVDDDTGNVLYEAESPDEAAFVIAAREFGFVFYKRTQTSLSMYEIDPVSGEKVERIYTLLNVLEFNSTRKRMSVIVKDEEGRILLMCKGADSVMFERLAKNGREYEEKTLEDVHEYADAGLRTLILAYRELDEEQYKKFDNEFSQAKISITANRETLLDELSDMIESNLILLGATAVEDKLQNGVPDCIDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQLIIQLESPEIKALEKAGDKSAIEKASRENIRHQISEGVRQLVASRGTSEEAFALIIDGKSLAYALEDNTIDMFLDLAIRCASVICCRSSPKQKALVARLVKFGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFHYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTVFLYEVCASFSGQPAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPILYQEGVQNVLFNWMSILSWMLNGFISAIMIFFFCTKAMEMQAFVKEGRIIERDILGATMYTCVVWVVNLQMALAISYFTLIQHIFIWGTIALWYIFLIVYGAIPPGISTNAYKVFIETLAPSPSYWILTLFVVISTLIPYFSYSAIKMQFFPFYHEMVQWIRYEGKANDPEFCHMVRQRSLRPTTVGSTARLASKTNSVRENSTNQR 1165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03336 1165 MobiDBLite consensus disorder prediction 1142 1165 - -
Trre9g03336 1165 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 52 1122 - -
Trre9g03336 1165 SUPERFAMILY HAD-like 385 876 IPR036412 -
Trre9g03336 1165 FunFam Phospholipid-transporting ATPase 88 258 - -
Trre9g03336 1165 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1110 IPR023298 -
Trre9g03336 1165 SFLD p-type atpase 379 883 IPR044492 -
Trre9g03336 1165 Gene3D - 663 872 IPR023214 -
Trre9g03336 1165 Gene3D - 88 258 - -
Trre9g03336 1165 Gene3D - 515 641 IPR023299 GO:0000166
Trre9g03336 1165 Pfam Phospholipid-translocating P-type ATPase C-terminal 860 1110 IPR032630 -
Trre9g03336 1165 NCBIfam phospholipid-translocating P-type ATPase 52 1117 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Trre9g03336 1165 SFLD C1.7: P-type atpase like 379 883 - -
Trre9g03336 1165 SUPERFAMILY Calcium ATPase, transduction domain A 113 255 IPR008250 -
Trre9g03336 1165 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 466 669 IPR023299 GO:0000166
Trre9g03336 1165 ProSitePatterns E1-E2 ATPases phosphorylation site. 399 405 IPR018303 -
Trre9g03336 1165 NCBIfam HAD-IC family P-type ATPase 803 914 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre9g03336 1165 PRINTS P-type cation-transporting ATPase superfamily signature 397 411 - -
Trre9g03336 1165 PRINTS P-type cation-transporting ATPase superfamily signature 832 851 - -
Trre9g03336 1165 FunFam Phospholipid-transporting ATPase 509 667 - -
Trre9g03336 1165 CDD P-type_ATPase_APLT_Dnf-like 52 992 - -
Trre9g03336 1165 Pfam Cation transport ATPase (P-type) 500 593 - -
Trre9g03336 1165 FunFam Phospholipid-transporting ATPase 667 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03336 Trre-Chr9 42024678 42030301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03336 6 1158 Primary Pumps ATPases AT1G68710 70.569 0.0 1779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03336 K01530 - gmx:100811892 1968.36