Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03326 ATGAGAACCAGCACTTCACTTCACAGTTTATCAGTGAATCAATACATCAAAGATGGTGAGACACTAGCTAATGGTGGAACTTTTGAAATGAGTTTCTTCAGTCCTGGAAATTCAAAAGGTAGATATTTAGGTATGTGTGGTTACATGCCTCCAGAGTATGTTGTACATGGTCACTACTCCATTAAATCAGATGTTTTTAGTTTTGGCGTAATAGTATTGGAAATAATCAGTGGGAATAAGATTAAGCGGTTTTATAATCCAGAACACTCTCTCAACCTTCTTCGACATGCTTGGAGACTATGGATTGAAAACATGCCAATGGAACTACTAGATACACATTTACTTGATATGTGCATTTCTTCCGACTGCATACATGTAGGGTTACTATGCGTACAACAAAAACCTGAAGATAGGCCGGACATGTCCTCTGTCGTTCTTATGTTGAATGGTGAAAAATTATTGCCTCAACCGAAGGCTCCTGGATTTTATACCGGAAATAGTTCAAGTGAAACCATGTCCCCATCATCAAATCATATGTCAACTACAAGTTTTGTGGGAAGATAG 564 0.3812 MRTSTSLHSLSVNQYIKDGETLANGGTFEMSFFSPGNSKGRYLGMCGYMPPEYVVHGHYSIKSDVFSFGVIVLEIISGNKIKRFYNPEHSLNLLRHAWRLWIENMPMELLDTHLLDMCISSDCIHVGLLCVQQKPEDRPDMSSVVLMLNGEKLLPQPKAPGFYTGNSSSETMSPSSNHMSTTSFVGR 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03326 187 SUPERFAMILY Protein kinase-like (PK-like) 38 148 IPR011009 -
Trre9g03326 187 Gene3D Transferase(Phosphotransferase) domain 1 22 156 - -
Trre9g03326 187 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 180 - -
Trre9g03326 187 Pfam Protein tyrosine and serine/threonine kinase 46 146 IPR001245 GO:0004672|GO:0006468
Trre9g03326 187 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03326 187 MobiDBLite consensus disorder prediction 164 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03326 Trre-Chr9 41943664 41944416 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03326 41 169 Receptor kinase-like Gene Family AT4G11480 49.254 2.62e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre9g03326 PK_Tyr_Ser-Thr 3.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03326 - - gmx:100782811 204.527