Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03290 ATGTCCATTCATCCTCCTCCCATGCTTGTTATTATTCTTAAGATACTATTTTTATTACTCTCTCAAATTTCATATGCAACCGATACTATGACCCAATCTACATCGATTCCCGACGGAAAAAGCTTGATTTCTAATGATGGAACCTTTGAGTTGGGTTTCTTCAGTCCGGGTAGTTCATCAAACCGCTATGTAGGACTTTGGTACAAAAATATCCCAATTCGAAGAGTTGTTTGGGTTGTCAACCGTGACAATCCGATCAAAGACAATTCAAGCAAGTTGATCATAAGCCGAGATGGAAATCTCGTGCTTCTCAATCAAAATGAGTCTTTCATTTGGTGGTCAACTAACATAACAACAAAGGTTTCAACTTCAAGTCTCGTTGTCCAGCTTTTGGACAACGGGAATTTAGTACTCAGAGATGAAAAAAATAAAAATAGTGGAGACGGTTTTTTGTGGCAGAGTTTTGACTATCCATGTGATACGCTATTAGCGGGAATGAAGATAGGAATCGACAAAAGAACTGGTCTTAATAGACATCTTACTGCATGGAAAAATTGGGACGATCCATCTTCGGGAGACTTTATTAATATTTTGGAACTTACCAGCAACCCTGAAGGCATGTTTTGGAAGGGATCAACAAAATACTACAGGACGGGACCATTGATCGGAGCTGAATCTAGGGGTTCGGTCGGATTGAGGGAAAATCCAATATATGGTTTTAAATATGCCAACAATGAAAATGAAGTGTATTATATGTTTACAGCCAAGAATATTTCTGTGATCTCTGCAGGTGTTCTAAACCAAACTCTTTCCGTTCGTCAACGTCTTCTTTGGGTACCTGAAACGAGCACATGGAACGTTTACCAATCGTTACCATTAGATAATTGTGATATTTACAATGTTTGTGGGGCAAATGGATATTGCACGATTGAAGGATCGCAAACATGTCGATGTTTAGATGGATTTAAACCAAAATCACCTGAACTATGGAATACCATGGATTGGAAACAAGGATGTGTTCGGAGTGGGAATTGGAGTTGCGGGGTAAAAAATAAAGATGGTTTTCGTAAATTTATTGGGATGAAATTTCCGGATACAACAAATTCATGGATTAATGCAAACATGACACTTGAAGAATGCAAGACCAAATGCTTAAAGAATTGCTCTTGCACAGGATATACATCCTTAGACCCAATTGGAGAAGGCAAAGGTTGCTCTATCTGGTTGGGTGATCTCATTGATTTAAGATTTTCACAAGACGGACAAGACTTATATGTTCGAATGGATTCCGCATATATTGATGCTAAACATGGAATCCGAAAAAAGGTAATCTTGACGGTTTCAATCACAGTTTCAATGGTTCTTGTGATGTTATTGGCATTCTCCTACGTTTATGTAACCAAAGTGAAGTATGAAGATGAAGATCAAGGCGAAGATAAAGATTTTGAGCTTCCTATCTTCGATCTAACAGCAATATCAAAGGCAACCAATAACTTCTCAATCGACAATAAACTCGGTGAAGGTGGTTTTGGACCTGTATATAAGGGTACATTGGAAGATGGTCAAGTAATTGCGGTAAAAAGACTTTCAAGAAATTCAGGACAAGGATCAAAAGAATTTAAAAATGAAGTTATATTGTGCACTAAATTGCAACATCGGAATCTTGTTAAAGTTATTGGTTGTTGCATTGAAGGAGAGGAGAAAATGCTACTCTATGAATACATGCCTAATAGAAGTCTTGATTCATTTCTATTTGATTTTGGCATGGCGAGAATGTTCGGAGGTGATCAAATCGAAGGGAAGACAAGAAGAATAGTCGGAACATACGGATATATGGCACCTGAATATGTCATTCATGGATTATTCTCTATAAAATCAGATGTATTTAGCTTTGGCGTACTATTGCTAGAAATCTTAAGTGGAAAGAAAAATAGAGCACTTACCTACCATGAACATGACCACAATCTTATTTGGCATGCATGGAGGTTGTGGAAACAAGACATTGCACATGAACTAATTGATGATTGTTTAAAAGATTCATGTAGTTTACCCGAAGCTTTGCGTTGTATTCAAGTTGGTCTCTTATGTGTACAACATGTTCCCGATGATAGGCCAAATATGACAAATGTCGTTATGATGTTGGGTAGTGAAATTACTTTACCTCAACCAAAAGAACCGGGTTTCTTAAATCAAAGAGTCTTTATTGAAGAAAAATCATCTTCTCAAAGTGAAACGCCTTCATTGAATGGTGTAACTATGTCACAATTAAATGCTAGATAG 2280 0.3724 MSIHPPPMLVIILKILFLLLSQISYATDTMTQSTSIPDGKSLISNDGTFELGFFSPGSSSNRYVGLWYKNIPIRRVVWVVNRDNPIKDNSSKLIISRDGNLVLLNQNESFIWWSTNITTKVSTSSLVVQLLDNGNLVLRDEKNKNSGDGFLWQSFDYPCDTLLAGMKIGIDKRTGLNRHLTAWKNWDDPSSGDFINILELTSNPEGMFWKGSTKYYRTGPLIGAESRGSVGLRENPIYGFKYANNENEVYYMFTAKNISVISAGVLNQTLSVRQRLLWVPETSTWNVYQSLPLDNCDIYNVCGANGYCTIEGSQTCRCLDGFKPKSPELWNTMDWKQGCVRSGNWSCGVKNKDGFRKFIGMKFPDTTNSWINANMTLEECKTKCLKNCSCTGYTSLDPIGEGKGCSIWLGDLIDLRFSQDGQDLYVRMDSAYIDAKHGIRKKVILTVSITVSMVLVMLLAFSYVYVTKVKYEDEDQGEDKDFELPIFDLTAISKATNNFSIDNKLGEGGFGPVYKGTLEDGQVIAVKRLSRNSGQGSKEFKNEVILCTKLQHRNLVKVIGCCIEGEEKMLLYEYMPNRSLDSFLFDFGMARMFGGDQIEGKTRRIVGTYGYMAPEYVIHGLFSIKSDVFSFGVLLLEILSGKKNRALTYHEHDHNLIWHAWRLWKQDIAHELIDDCLKDSCSLPEALRCIQVGLLCVQHVPDDRPNMTNVVMMLGSEITLPQPKEPGFLNQRVFIEEKSSSQSETPSLNGVTMSQLNAR 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03290 759 Gene3D Phosphorylase Kinase; domain 1 473 570 - -
Trre9g03290 759 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 189 IPR036426 -
Trre9g03290 759 Pfam PAN-like domain 347 415 IPR003609 -
Trre9g03290 759 SMART ntp_6 350 428 IPR003609 -
Trre9g03290 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 574 - -
Trre9g03290 759 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 705 - -
Trre9g03290 759 Pfam Protein tyrosine and serine/threonine kinase 500 584 IPR001245 GO:0004672|GO:0006468
Trre9g03290 759 Pfam Protein tyrosine and serine/threonine kinase 586 713 IPR001245 GO:0004672|GO:0006468
Trre9g03290 759 Pfam S-locus glycoprotein domain 216 326 IPR000858 GO:0048544
Trre9g03290 759 Gene3D Transferase(Phosphotransferase) domain 1 571 717 - -
Trre9g03290 759 CDD PAN_AP_plant 346 427 - -
Trre9g03290 759 SUPERFAMILY Protein kinase-like (PK-like) 482 723 IPR011009 -
Trre9g03290 759 ProSiteProfiles Bulb-type lectin domain profile. 27 151 IPR001480 -
Trre9g03290 759 Gene3D Hepatocyte Growth Factor 346 429 - -
Trre9g03290 759 Pfam Domain of unknown function (DUF3403) 718 759 IPR021820 GO:0004674
Trre9g03290 759 ProSiteProfiles Protein kinase domain profile. 393 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03290 759 ProSiteProfiles PAN/Apple domain profile. 347 429 IPR003609 -
Trre9g03290 759 MobiDBLite consensus disorder prediction 737 759 - -
Trre9g03290 759 CDD B_lectin 35 158 IPR001480 -
Trre9g03290 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 155 - -
Trre9g03290 759 Gene3D - 21 155 IPR036426 -
Trre9g03290 759 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 593 719 - -
Trre9g03290 759 SMART blect_4 33 158 IPR001480 -
Trre9g03290 759 Pfam D-mannose binding lectin 76 184 IPR001480 -
Trre9g03290 759 PIRSF SRK 586 759 IPR024171 GO:0004674
Trre9g03290 759 PIRSF SRK 1 586 IPR024171 GO:0004674
Trre9g03290 759 ProSiteProfiles EGF-like domain profile. 292 328 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03290 Trre-Chr9 41549023 41552275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03290 475 759 Receptor kinase-like Gene Family AT4G23150 40.805 2.50e-79 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre9g03290 PK_Tyr_Ser-Thr 2.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03290 - - tpra:123904477 1085.86