LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre9g03288	ATGGCAAAGTATCATGTTGTTTTATTCTTCTTTGTGTCTTTGGGTTTGGCATCAATAACTTCTTTCATGTGTGATGCCATTAAAAGTGGTGATGAAACCAATAAACTTTACATTGTATATATGGGCTCACTTCCTAAGGAAGCATCCTATTCTCCATCCTCTCACCATCATAGTATGTTGCAACAAGTTATTCATGGTAGTGATCTAGAAAATCGCTTGGTCCAAAGTTACAAAAGGAGTTTTAATGGTTTTTCTGTCATATTCAATGATCAACAAAGGGAAAAACTTGTTGGCATGAAAGGTGTTGTCTCGGTGTTTCCAAGTCAAGAGTATTCCCTTCAAACCACAAGATCGTGGGACTTCCTTGGTTTACCTCAGTCAATCAAAAGAGGTAAAACTGTTAAGAGTGATTTGGTGATTGGAGTTTTAGACACCGGAATTTGGCCAGAATCTAAAAGTTTTAAAGATAAAGGTCTTGGTCCTATTCCAAAAAAATGGAGGGGAGTTTGCGCAGGCGGTGGCGGAAGAAAGGTAAAGGGTGTGAGCTATCATGGTCTTGCAAAAGGCACCATAAGAGGTGGAGTTCCATCTTCAAGGATTGCTGTATACAAAGTTTGTAACCCAAAATGTCGTGGTGATAATATTTTAGCAGCTTTTGATGATGCCATTGCCGATGGAGTTGACATCATAAGCATATCTATTGGAAAAGAACATGCTGTTGAATTTATTAAAGATACTCTTGCTATTGGTTCTTTTCATGCCATGGAAAAAGGAATACTAACAGTGCAGGCATCAGGCAACTATGGTCCTAACCCAAGTACTATTTCAAGCGTAGCACCTTGGTTATTTAGTGTTGCCGCAACTACCATAGATCGTCAATTCATTGATAAACTCATTCTTGGAAATGGAAAGACTTTTATTGGGAAGTCGATTAATGTTGTCTCCTCAAATGGCACAAAATTTCCGATAGTTGTGTGTAATGCTACGTCTTGCCATGGAGATTATACATCCGCTGAAAAATGTCCATGTATAGACACAAAATTGGTAAAGGGTAACATTGTTTTGAGTGGAGATATAGATGGTGGAGTTTTGGCTTATTCATATGGGGCGATTGGTTCAATCCTTAATTCTACCTTTGATGCGTCTATTACTCATCGACCTTCACTTAACTTGGATTCAAAAGACTTTGATCTTGTTCAATCTTACACTTACTCCACTAAATACCCTGTAGCTGAAATACTGAAGAGTGATGTCGTTCAAGACACCACTGCTCCTAAAGTTGCATCTTTCTCTTCTCGTGGTCCAAATCCCATTGTACCAGAAATTATGAAACCATACATAAGTGCCCCTGGAGTCAATATCTTGGCTGCATATTCACCTAACGGACCAATCCCCGATGAGGTTATTTTTAACGTACATGAGAAATACATTATAGTATCTGGTACCTCTATGGCATGTCCCCATGTTGCAGGAGTTGCCGCATATGTTAAATCATTTCATCCAGATTGGTCACCTGCAGCTATCAAATCGGCCATCATGACCACGACGAAACCAGTGAATGGTACTTATAATGATATGGTAGGCGAGTTTGCTTATGGATCTGGAAATATCAATCCACAACAAGCTCTTGACCCTGGACTGATTTATGACATCACTAAGCAAGATTATATGCAAATGCTTTATATAAATTATCCTGCGCTGGTGATTCTTGTTAGGCCTCATAAGCGTTTTAGTGCTAAAATTCATAGAACAGTGACAAACGTTGGTTCTCCTAACTCAAGCTACACAGCTACTATCATCCCAATTCCAAAAATCAATATTAAAGTGGTGCCAAAACTTCTCTCATTCAAATCCTTACATGAGAAACAATCATTTGTTGTCATTGCTACTGGAGGAGCAAAATCAAATCAAACTATGTTTTCTTCATCACTTGTTTGGTCTGATGGAACCCACAATGTGAAAAGTCCAATCATTATACAAATTCTCTCTTAA	1992	0.385	MAKYHVVLFFFVSLGLASITSFMCDAIKSGDETNKLYIVYMGSLPKEASYSPSSHHHSMLQQVIHGSDLENRLVQSYKRSFNGFSVIFNDQQREKLVGMKGVVSVFPSQEYSLQTTRSWDFLGLPQSIKRGKTVKSDLVIGVLDTGIWPESKSFKDKGLGPIPKKWRGVCAGGGGRKVKGVSYHGLAKGTIRGGVPSSRIAVYKVCNPKCRGDNILAAFDDAIADGVDIISISIGKEHAVEFIKDTLAIGSFHAMEKGILTVQASGNYGPNPSTISSVAPWLFSVAATTIDRQFIDKLILGNGKTFIGKSINVVSSNGTKFPIVVCNATSCHGDYTSAEKCPCIDTKLVKGNIVLSGDIDGGVLAYSYGAIGSILNSTFDASITHRPSLNLDSKDFDLVQSYTYSTKYPVAEILKSDVVQDTTAPKVASFSSRGPNPIVPEIMKPYISAPGVNILAAYSPNGPIPDEVIFNVHEKYIIVSGTSMACPHVAGVAAYVKSFHPDWSPAAIKSAIMTTTKPVNGTYNDMVGEFAYGSGNINPQQALDPGLIYDITKQDYMQMLYINYPALVILVRPHKRFSAKIHRTVTNVGSPNSSYTATIIPIPKINIKVVPKLLSFKSLHEKQSFVVIATGGAKSNQTMFSSSLVWSDGTHNVKSPIIIQILS	663

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre9g03288	663	Gene3D	Peptidase S8/S53 domain	174	551	IPR036852	GO:0004252\|GO:0006508
	Trre9g03288	663	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	174	658	IPR045051	-
	Trre9g03288	663	Pfam	Subtilase family	136	535	IPR000209	GO:0006508\|GO:0008236
	Trre9g03288	663	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	21	114	IPR037045	-
	Trre9g03288	663	Pfam	Fibronectin type-III domain	562	659	IPR041469	-
	Trre9g03288	663	ProSiteProfiles	Serine proteases, subtilase domain profile.	118	543	-	-
	Trre9g03288	663	Gene3D	-	291	420	-	-
	Trre9g03288	663	ProSitePatterns	Serine proteases, subtilase family, serine active site.	481	491	IPR023828	-
	Trre9g03288	663	CDD	PA_subtilisin_like	298	413	-	-
	Trre9g03288	663	Gene3D	-	552	662	-	-
	Trre9g03288	663	PRINTS	Subtilisin serine protease family (S8) signature	480	496	IPR015500	-
	Trre9g03288	663	PRINTS	Subtilisin serine protease family (S8) signature	135	154	IPR015500	-
	Trre9g03288	663	Gene3D	Peptidase S8/S53 domain	137	173	IPR036852	GO:0004252\|GO:0006508
	Trre9g03288	663	Pfam	Peptidase inhibitor I9	37	113	IPR010259	-
	Trre9g03288	663	SUPERFAMILY	Subtilisin-like	113	547	IPR036852	GO:0004252\|GO:0006508

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre9g03288	Trre-Chr9	41527085	41531218	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre9g03288	31	659	Subtilisin-like Serine Gene Family	AT3G46850	46.056	0.0	612

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre9g03288	-		-	psat:127076787	791.571