Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03265 ATGAGTAAGCGAAAGGCAATCGTGCTAGCAGTATCCCATATCGAAATAAAAAATTCAATGAGTCTCAATGCTGGTAATGATGGTGAAGATGCATCAACAAATTCATTCAAAAAAAGTTCTCCATTTCTCCTGTTTGGATTCATTATTGATCCAAATAAGGGGATTCAACATGCTTACTCATGCAATTTTTGTAGCCGAAAATTCCTTACCCGTCAAGCATTAGGCGGGCATCAAAATTTCCACAAATTGGAGAGGAGAGTCAAAAAAAGGACCGAAGCTAGTAACCAACGGATGGATATTCCACAGATCGATGAAGTGATCAATGATGCTGATCAAGACATTGTTAGTCAACAAGCTACTATGGCTGAGGTTGACTATCATTCAATTTCAAATGCTGGTGATGATGTTGATTATGAAGACAAAGACACTCAAGAGGAGGAAGCAATCCAAGATGATTTGATCCTTAAGCTTTGA 474 0.3819 MSKRKAIVLAVSHIEIKNSMSLNAGNDGEDASTNSFKKSSPFLLFGFIIDPNKGIQHAYSCNFCSRKFLTRQALGGHQNFHKLERRVKKRTEASNQRMDIPQIDEVINDADQDIVSQQATMAEVDYHSISNAGDDVDYEDKDTQEEEAIQDDLILKL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03265 157 MobiDBLite consensus disorder prediction 131 150 - -
Trre9g03265 157 Gene3D Classic Zinc Finger 47 122 - -
Trre9g03265 157 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Trre9g03265 157 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Trre9g03265 157 PANTHER ZINC FINGER PROTEIN JAGGED 22 110 IPR045320 GO:0003700
Trre9g03265 157 SUPERFAMILY beta-beta-alpha zinc fingers 57 87 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03265 Trre-Chr9 41287072 41287670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03265 59 131 C2H2 Transcription Factor Family AT1G80730 39.726 2.89e-11 57.8