Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03254 ATGAGTCTCCGTAAGAGCTCTGAGGTTTGGGTCTCTAATAGGTATTTCGCTTGGCTTCCTACTGAAGTTCTTGAATCTTCTGAAAAGCAAGTTCGCGTTCAAACTGATTCCATCAATAAGACATATACAGGGAACATTTTAATAGTTGTTAATCCATTCGCAAAGCTTCCTCATTTGTACAATAAACATATGATGGAGCAGTATAGGGGAGCACCTTGGAGACCTCGGTCCACATGTATTTGCATGTTGCCAATGCATCATATAGGTCGAAGCCAATCTATCTTGGCCAGTGGTGAAAGTGGTGTCGGGAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGGTGTGCTATTTTTGATTATAGAACAATTGAACAACAAGTTCTTGAACTTGCTATCCATATGACTGAATCTATAATGGTCACAATCTCAGTCATGCCTATATCAAATCCACATCTAGAACAACCCACTTAG 489 0.3947 MSLRKSSEVWVSNRYFAWLPTEVLESSEKQVRVQTDSINKTYTGNILIVVNPFAKLPHLYNKHMMEQYRGAPWRPRSTCICMLPMHHIGRSQSILASGESGVGKTETTKLIMQYLTFVGGCAIFDYRTIEQQVLELAIHMTESIMVTISVMPISNPHLEQPT 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03254 162 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 136 IPR027417 -
Trre9g03254 162 Gene3D Kinesin motor domain 22 146 IPR036961 -
Trre9g03254 162 PRINTS Myosin heavy chain signature 40 59 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre9g03254 162 PRINTS Myosin heavy chain signature 91 116 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre9g03254 162 PANTHER MYOSIN 30 159 - -
Trre9g03254 162 Pfam Myosin head (motor domain) 32 135 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre9g03254 162 ProSiteProfiles Myosin motor domain profile. 41 162 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03254 Trre-Chr9 41215532 41217159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03254 1 135 Myosins gene family AT4G33200 42.632 3.87e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03254 K10357 - csv:101210527 146.747