Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03251 ATGAGTGTTAGCTCACAATCAAGTTGTGTTACAAGCTCACAACAAACATCACATATTGATTCTGTTTCCATTGATACAATGAAAAGTGTAATAAGACATAGATGGACTGGTAGATATGAAGCTCATCTATGGGATAACAGTTGTAAGAAAGAAGGACAAGCTAGGAAAGGAAAGCAAGAAAATTATCAAAAGGAGCTTGAAGAAATGAAGAAAATGACTAGACAAGAATATGTTGCACATTTAAGAAGGAAAAGCAGTGGATTCTCAAGAGGGGCTTCAATGTATAGATGA 291 0.3505 MSVSSQSSCVTSSQQTSHIDSVSIDTMKSVIRHRWTGRYEAHLWDNSCKKEGQARKGKQENYQKELEEMKKMTRQEYVAHLRRKSSGFSRGASMYR 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03251 96 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 60 96 - -
Trre9g03251 96 Coils Coil 55 75 - -
Trre9g03251 96 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03251 Trre-Chr9 41168761 41170043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03251 23 96 AP2-EREBP Transcription Factor Family AT4G37750 53.913 1.59e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03251 K09285 - pvy:116133647 125.561