Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03181 ATGGCTAAAATTATTGATATAGATCAACATCAAGGAAATACAATAAGGATTGCCGGAACTTATGGTTATATGTCTTATGAATATGCAATGCATGGGCATTATTCGGGAAAATCTGATGTGTTTAGCTTTGGGGTCATAATTATAGAGATAATTAGTGCAAAGCGGAATTCACTTCGTCTTGATTCACCAGATTTTTGTTGGGGAAAACTAGAATTAATAGAAGATGAGGATGCAGAAAATAAGAGAGCTGGTAACAACCCCCTTGGTCAGTCACCCGCGTCCTCTTCCTCTAGATCTTCATTTTCACCATCATCTCCATCGTCCTTTGTCCCGTCTTTCTATGAATCGTCATGA 354 0.3842 MAKIIDIDQHQGNTIRIAGTYGYMSYEYAMHGHYSGKSDVFSFGVIIIEIISAKRNSLRLDSPDFCWGKLELIEDEDAENKRAGNNPLGQSPASSSSRSSFSPSSPSSFVPSFYESS 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03181 117 Gene3D Transferase(Phosphotransferase) domain 1 1 104 - -
Trre9g03181 117 Pfam Protein tyrosine and serine/threonine kinase 19 54 IPR001245 GO:0004672|GO:0006468
Trre9g03181 117 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 57 - -
Trre9g03181 117 MobiDBLite consensus disorder prediction 78 117 - -
Trre9g03181 117 MobiDBLite consensus disorder prediction 84 117 - -
Trre9g03181 117 SUPERFAMILY Protein kinase-like (PK-like) 2 57 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03181 Trre-Chr9 40286699 40290373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03181 1 57 Receptor kinase-like Gene Family AT4G11530 68.421 9.26e-22 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre9g03181 PK_Tyr_Ser-Thr 1.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03181 - - cam:101500396 117.087