Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03174 ATGGATGGGAACCCTAACTCTTCCGAACTTCTCCGCCAAGTTCAAGCAGCTCTAAAACGCCGTCGAAATCCCGTTTTTGAAAATTCTTCACCAGGTGGTGCGTTGCAATCAAATATCATACGCCCAAAGCGTTCTGCTGTTGCTGAAGCAAAGGCCATGAACAAATCTGATGATTCTCAAACGAGTTTGGATCAATTAGGGAATGATTCACTTTCGCTTCGAAAGGGTAGTGAAGTTGTTGTTGCTGGAGAGGGGTTCAGTGATGTTAAGGCCAGTGATTTGGAGAACATATCATCTCATTTGGGTTCACTTGCATTGACAGAAATGGAGTGTTTGGCAAGCAGCCTACCTGAAGCATCAAATGGAATCAATCAAGACTCTAAATACAAAACTATTCAGCAGGCAGAGTCTGAAAGAAGCTTGATATCTGAAGGAGGCAAAATTTCTATGGTGCCAAGGAGAACAATAACTAATCAAGATAATTTGCATAAATTCAAAAACTTTTTAAGCCAGCCAGCTACACAATCTTCAGTAGTTGGTACTTCGTGTGCAACAACTACATCAGTTCATTCAAGTTCAGCTCCCATGCTGAATTCTTTAACTGGTTCTTCTCATTCCCATCCAAATAGTGCCTCAAATTTGGTTACAAAACGCTGTGGGAACCTTAATCCTCATCCAATAACTCATGGGGTTATTAAATCAGCAAATACATCCCTAAAAGAAACCGCTGGAATATCAACTGATCAAGCAACTACTGCAGTCCAAGCTTGTAGTTCACTTACTGATGCTGAATTGACGTTTAAGGAGAGCAACCCATCTAAGGAGCAGCAAGGATGCACTTTAAAGCAAACTAGTATTTCCAATCATGGTTCCTATAATGACGATGCATTAACTAAAGGAAAAGAGTCTGCTGTTGCTACCAACACACAACCTGAGGCTCCAACTGTATCTTCAGATGTGAAGTTGGAGTCTTCAAAGTTAGGTAAACCAGATAAATTAGCTGCAAGTTCCAAAGGATCGTCAGGTGCTCGGAAAAGGACCTATGACCCGGATTATTTTTTTAAAGTTAGTGGAAAACTATATCAAAGACTCGGAAGAATAGGTACTGGTGGAAGTAGTGAGGTACACAAAGTGATATCATCAGACTGTACAATCTATGCGCTTAAAAAGATTAAGCTAAAGGGTCGTGATTATGCCACTGCATACGGATTTTGTCAAGAGATTGAGTATCTAAACAGGCTGAAAGGAAAAAATAATATCATACAGCTTATAGATTATGAGGTGACTGACAAAGCTTTGCTTGAAGGAGTCATGAGTGGCTCCTTCAACAATAAGGATGGTAGAGTCAAGGATGATGGATTTATATACATGGTACTTGAACATGGGGAAATTGACTTGGCTCATATGTTGTCTCAGAAGTGGAAGGAACTGGATGGGTGCAACCAAACCATAGATGAAAACTGGCTTCGATTTTATTGGCAGCAAATTCTTCAAGCTGTCAACACAATCCATGAGGAACGTATTGTGCATTCTGACTTGAAGCCTGCAAATTTCCTCCTTGTCAAAGGTTCCCTAAAATTGATTGATTTTGGTATAGCCAAAGCAATAATGAGTGATACAACAAATATCCAGCGGGATTCACAGGTTGGAACTCTAAATTATATGTCACCAGAGGCATTTATGTGCAATGAGAGTGATGCGAATGGGAACATCATCAAGTGTGGTCGGCCATCAGATATCTGGTCGTTAGGCTGCATCCTTTATCAAATGGTATATGGAAGAACACCTTTTTCAGATTACAAGACATTTTGGGCCAAAGTCAAGGTCATAACTGATCCAAATCATCAAATTACGTATGAACCAGTTTCGAACCCATGGCTCGTTGATCTTATGAAGAAGTGTCTTGCATGGGACCGCAATGAAAGGTGGAGAATTCCTCAGTTACTCCAACATCCTTTTCTTGCTCCTCCAGTTTCATGTCATCCTTCTTTGTCCCAAGACAATACCTTTAAATGGCTGCAACTTATTGCTGAAACCTGTAAATGTGACCAAGAAGCATTGCAGCTTTGTTATCAGCTGCAACAGGTGCTTGGTGACCCCTTTAAGTTGGTAACTCCTGACACAACGAATTCACGAGACGGACAGTGTAAATTGCTTTCCCGCATATCAGAACTCTGTGTTCAGCTGCATGAAAGATTAACAAATTCTGATAACAAATAA 2220 0.4054 MDGNPNSSELLRQVQAALKRRRNPVFENSSPGGALQSNIIRPKRSAVAEAKAMNKSDDSQTSLDQLGNDSLSLRKGSEVVVAGEGFSDVKASDLENISSHLGSLALTEMECLASSLPEASNGINQDSKYKTIQQAESERSLISEGGKISMVPRRTITNQDNLHKFKNFLSQPATQSSVVGTSCATTTSVHSSSAPMLNSLTGSSHSHPNSASNLVTKRCGNLNPHPITHGVIKSANTSLKETAGISTDQATTAVQACSSLTDAELTFKESNPSKEQQGCTLKQTSISNHGSYNDDALTKGKESAVATNTQPEAPTVSSDVKLESSKLGKPDKLAASSKGSSGARKRTYDPDYFFKVSGKLYQRLGRIGTGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNIIQLIDYEVTDKALLEGVMSGSFNNKDGRVKDDGFIYMVLEHGEIDLAHMLSQKWKELDGCNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLNYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKVKVITDPNHQITYEPVSNPWLVDLMKKCLAWDRNERWRIPQLLQHPFLAPPVSCHPSLSQDNTFKWLQLIAETCKCDQEALQLCYQLQQVLGDPFKLVTPDTTNSRDGQCKLLSRISELCVQLHERLTNSDNK 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03174 739 MobiDBLite consensus disorder prediction 268 294 - -
Trre9g03174 739 PANTHER MIXED LINEAGE PROTEIN KINASE 43 680 - -
Trre9g03174 739 MobiDBLite consensus disorder prediction 268 344 - -
Trre9g03174 739 MobiDBLite consensus disorder prediction 302 322 - -
Trre9g03174 739 FunFam serine/threonine-protein kinase mph1 isoform X2 354 441 - -
Trre9g03174 739 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Trre9g03174 739 Gene3D Phosphorylase Kinase; domain 1 354 440 - -
Trre9g03174 739 SMART serkin_6 361 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03174 739 Gene3D Transferase(Phosphotransferase) domain 1 476 659 - -
Trre9g03174 739 ProSitePatterns Protein kinases ATP-binding region signature. 367 389 IPR017441 GO:0005524
Trre9g03174 739 ProSiteProfiles Protein kinase domain profile. 361 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03174 739 Pfam Protein kinase domain 361 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g03174 739 FunFam serine/threonine-protein kinase mph1 isoform X1 475 657 - -
Trre9g03174 739 CDD PKc_Mps1 359 654 IPR027084 -
Trre9g03174 739 SUPERFAMILY Protein kinase-like (PK-like) 356 661 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03174 Trre-Chr9 40185744 40191852 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03174 367 654 MAP Kinase Kinase Kinase AT4G08470 30.169 1.34e-22 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Trre9g03174 Pkinase 3.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03174 K08866 - gmx:100795003 999.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03174 9 40185744 40191852 Trre9g03174 9 40185744 40191852 ECH