Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03169 ATGGCAAGTTATGTAGAACAGTCGGATAGTTTCACCTATGATGTTTTCCTCAGTTTTAGAGGGGAAGACACGCGGCACAATATTGTTGGATATCTTCTCGACGCATTTGAGAAGAGGGGAATCAATGTTTTCTATGATGATAAGAAACTGGAATTAGGGGAAGACATTTCACCTGCACTTTTTAAAGCCATAGAAGAATCGAATATCTCAGTTATTGTTTTTTCTAAGAATTATGCATCTTCTAGGTGGTGCCTTGATGAGCTCGCAAAGATCATGGTATGTACGAAAAGAAACAAGAAACAAATTGCTTTTCCAATATTTTACCATGTTGATCCATCTGATGTACGACATCAAAGAAAGAGCTATGGAGAAGCCATGGCTGCTCAACAGAAGAGGTTTGGAAAAGACTCAGAAAAAATAAAAGCATGGAAAGCAGCATTGTCTCAAGTGGCAGACTTGAAAGGTCACCATATCGCTCGGGGTATGTTCGAAAGGTTCGAAATCGATCATGTTAAAGAGATTGCTGAAAAGGTCTATGCTAAGATACCTCCTATATCTTTACATGGTGAGAATCCAATTGGACTTGATCAACGCATAGAAGAGGTGAAGTCACTTCTAGACTTGAAGCCAAATGACAATACTGTATGCATGTTGGGCATATATGGCCTTGGTGGATTAGGGAAAACAAATCTTGCAAAAGCATTGTATAACAAGATTGCACACCAATTTCAAGCTGCATGTTTTCTTGCCAATGTTAGAGAGAAATCAAACAAAATCAACGGCTTAGAAGATTTACAGCTGACACTTTTATCAGAGATGTTTGAGAAGTCAGATTCTATGTTGGGAAGTACAAGTAGAGGAATCATGGAAATAAAACTCAAGCTTGGAAAGAAAAAGGTTCTTTTGGTTCTTGATGATGTTATTGAGATGAACCAATTAGATAACTTGGCAGGAGGAAGTGATTGGTTCGGTCCAGGAAGTAGGATCATTGTAACTACAAGGGACAAAGGTTTGCTCATTGCTATTCATCAAATAGAAATTAAGACTTATGAAATGACTGAACTTAATGATCAACACTCTCTTGAATTGTTTTGTCGAAATGCATTTGGAAAAAGCAATCCTAAAGCAGGATATGAAGTTGTGTCTTCTCGTGCTGTTGGTTATGCGAAAGGTCTCCCATTGGTTTTAAAAGTTATAGGCTCCAATTTGGCTACTAGAAAAAGTTTAAAAGCTTGGGAGGATGCATTGGAAGATTATGAGAGGATTCCGCGTAAAGGGATTCAAGATGTGCTTGAAATAAGCTATGATGTGTTGGAGCCTTATGCCCAAAGTGTTTTCCTAGATATAGCTTGCTTCTTCAAAGGGGAAAAGAAAGAATATGTTGAAGAAATACTTAGTGAATTCAGTGCAGCATCAAATATTGAAGAGCTTGTTAATAAATCTCTCTTGAATGTTGAAGATGGATACTTGTATATGCATGATCTAATACAGGATATGGGTAGAGAGATTGTTAGGAAAGAGGCGCCAAACAATCCTGCAAAACGTAGTAGATTATGGCTTGAACAAGATGTCATTGATGTGTTATCGGCCAATGATTCTGGAAGTGATGCAATTCAAGGGATAATGCTTGATCCTCCTAATGATACAACAGAAGTATATTGGAATGGTTCTGCTTTTGAGAAGATGCACCGTCTAAGAGTTCTCATTGTTCGACGTACAACTTTTTCATCCGAGCCTAAATATCTTCCAAATCATTTAAGGCTACTTGAATGGGAGAAATACCCTTCAAAGACTTTCCCACCAAATTTTTATCCGATAAAAGTCATCATATTAAATTTGTTTGCAAGTCAACTTACAATGGAAGAGCCATTTAAGCACTTTTCATATCTGACTGTCATTGATTTCCCAACTAATGAATCTATCACAGCAATGCCGGATGTGTCCAAAGTTGAAAATTTGAGAGAATTGCGACTTGATGATTGTTTGAACTTAACTACGGTTCATGAATCCATTGGATTTCTCAAACATCTTGTCCACTTAAGCGTTTCGAAATGCTATAGACTTGAAAACTTTCTGCAAAGAATGTTTTTACCATCTCTAGAAGTCCTTAACCTTGATTTCTGTTCTAGTCTTGAACACTTCCCAAATATAGTGGATAAGATGAATAAACCATTGAAGATTCAAATGATAGGAACCTCTATTAAGAAGCTGCCAAATTCTGTTGATAATCTTATTGGACTTGTTTCAATAGACATGGAACATTGTCAGAAACTCGAATATCTACCAAGTAGCTTGTTTAGGTTACCAAATATTGTTGCTTTTAAATTTTCAACAACAACTCGAATACCTGCCAAATGTTTCAAACTTGGTGAATCTTTCAGAAGATTTCTACATGATTACCCTTCACAAGCAAATGAATGTTCAACATTAAAAACAATTGATATTACGAATTGTGGTTTGTTAGAGGAAGATATTCAAACAATTCTCATATGTTTTCCAAAATTAGAAGAATTGATGTCTTACACACATTTCAGAGTTGCCATGCACTATTCAAAAAATAGATGCAAGCCATTGCTTATTGAGTTCGATACTCGAAAGCATGTTGTTCAGCTTCATTTGGTTATCAACGGTGAACATATCTTTTGCAAACGCTATTACGAGTTCAGTATTAGACAGGATCATGTTTTAGTTTGTGATCTACGACTCTTATACAATGACGAGGAGTGGCTAAGCATTGATGCATTACTTCTTAAGAATGAATGGAATCAAGTGCAAATTTCATATGAAGTCAAGTACCAGCACTTGACACTAAGTGAACGGCATACATGCCAAATCTCATATGAAGCCAAAAACATTCCGGTGACAACAAGTGAATGGGGAGTTTTTGTGTACAAACAAGGAACTGATGATAACTTGGAAGAACATGTTCAATTCATGTGTCCTGACCCAACAAGGTATCTCAATGAATCACGTGATGATAAAGAGGAAATGAAACCTGTCATAAGTGGAGAAGCTTCAACCTCTAGCCATCAGGGAAGTTCAGAGGCCCAACTCAGCAAGGCTGATAAATTTGAAATAATGAAAGATGTATACTCAAAAGGAAAGATGGATGGATTCCTAGAAGCACTTGCTCAGAAGGACATAAATCGTCATTTGTTTGAGGGGAATGATGATTCACACGCAAAAGAATCAAGCATTTCTGACTCAAAGATTTGCGCTGACATTGGAAATGAAGGGTGCAAAGATGTTTCAATCCTGAAGAAGCGGGTTGCTGGCTTGAAAAAAAAAGAAGAAGAATTGTTGAGTCTCTCTAATGCTGCAACTGAAGAATTCCGCAACTCAAAAGATATTCAAGTTTTAATGAGGGGCATATACTTGAATGGACGGAGGGATGGAGTCCTTGAAGTACTGGCCACTTTCTTGTTTGAGAAGAATGAGGAAAATGATTCTAAAGATGAGCCAACAAACTTTGAGTTTACAGATGAAATGAAACCTGCCGTAGGTGTAGGAGAAGCTTCAACCTCTGACCATCAGGGAAGTTCAGAGGCCCAAGACAGCCATGCTGAGCAGGATGAAATACTGACAGGGATATTCATGAACGGAATGGCGGCAGGACTTCGTGTAGCACAGAGTAGCTTTCCTTCTCTAGATATAGCCACTACAATAATTTCTGCCTATAATAGAGGTGAATGGGTTAGATTGTCAGTCCCGGTGTCCGAGGTAGAAATGAAGATATACATGGAAGGAGTTATCAACGGACTTCTAGAAGCAAAGGTGAGCTTTCCCACTCTGAAAGAATGGGAAATACTAAATACCGTGTTAAGAAAGAAGGGCCATAACATAATGTGTCAAACAATGGATTGGACTGAAATAGTGGTTCCAAGCTCTGATGTTCCTTTGTTGGAATCATTCATGATGATGAAGCAAGGAGGTTGCGACTCGGTGAGGGCCGAGAGTTTCTGCAAGTTTCTGGAGGAACACAATGCTCTGCGCAAGAAAATTGAAGAAATTGAAAATGAATCTGCTACTACGGATAATTCAAAGAAGGGTCACAGCCTTGATGAGAAGCTGGCTACAATTTTGAAAGGAAGAGCTGAAGAGGTGCAGATGGACTCCTACTGTCCTACATACTCAATCCAGAACTCAAAAGAGATTCAAGATTTGATGACAGCTACATACTCAAATGGAATGAGGGATGGACTCCTTGAAGCACGGGCCATATTACTTGCACTGAACATGGACATAATAACTCATGAGTTTGAGTGGAATGAAAATGAAATTTCTGCTCAGGGTAATGATAGTCGTATTCTTCCTTCGAAAAATCAATATGGTAATTTTCTTGAGAAGCTTAACACTCAATTTGGTGAGCATATTTCAAAGAAGGACCATACCTTTGATGGTAATGATGATTCATGCGCAAAGGAATCAAGTATTTCTGACTCAAAGATTCGCACTGACATTGGAAAAGAAGGCTGCGAAGATGTTTCGAAGCAGAAGAAGCTGGCTGCTGTCTTGAAAGAAAGAGAAGAAGAATTGTTGAATCTCTATGATGCTGAAATTGAAGAATTCCAGAACTCAGAAGAGATTCAAGATTTGATGAGTGTCACATACTTGAATGGACTGAGGGATGGAGTCCTTGAAGCACAGGCCTCTTTACTTTCTTGGTTTGAGAAGAATGAGGAAAATGATTCTAAATTGTAG 4701 0.381 MASYVEQSDSFTYDVFLSFRGEDTRHNIVGYLLDAFEKRGINVFYDDKKLELGEDISPALFKAIEESNISVIVFSKNYASSRWCLDELAKIMVCTKRNKKQIAFPIFYHVDPSDVRHQRKSYGEAMAAQQKRFGKDSEKIKAWKAALSQVADLKGHHIARGMFERFEIDHVKEIAEKVYAKIPPISLHGENPIGLDQRIEEVKSLLDLKPNDNTVCMLGIYGLGGLGKTNLAKALYNKIAHQFQAACFLANVREKSNKINGLEDLQLTLLSEMFEKSDSMLGSTSRGIMEIKLKLGKKKVLLVLDDVIEMNQLDNLAGGSDWFGPGSRIIVTTRDKGLLIAIHQIEIKTYEMTELNDQHSLELFCRNAFGKSNPKAGYEVVSSRAVGYAKGLPLVLKVIGSNLATRKSLKAWEDALEDYERIPRKGIQDVLEISYDVLEPYAQSVFLDIACFFKGEKKEYVEEILSEFSAASNIEELVNKSLLNVEDGYLYMHDLIQDMGREIVRKEAPNNPAKRSRLWLEQDVIDVLSANDSGSDAIQGIMLDPPNDTTEVYWNGSAFEKMHRLRVLIVRRTTFSSEPKYLPNHLRLLEWEKYPSKTFPPNFYPIKVIILNLFASQLTMEEPFKHFSYLTVIDFPTNESITAMPDVSKVENLRELRLDDCLNLTTVHESIGFLKHLVHLSVSKCYRLENFLQRMFLPSLEVLNLDFCSSLEHFPNIVDKMNKPLKIQMIGTSIKKLPNSVDNLIGLVSIDMEHCQKLEYLPSSLFRLPNIVAFKFSTTTRIPAKCFKLGESFRRFLHDYPSQANECSTLKTIDITNCGLLEEDIQTILICFPKLEELMSYTHFRVAMHYSKNRCKPLLIEFDTRKHVVQLHLVINGEHIFCKRYYEFSIRQDHVLVCDLRLLYNDEEWLSIDALLLKNEWNQVQISYEVKYQHLTLSERHTCQISYEAKNIPVTTSEWGVFVYKQGTDDNLEEHVQFMCPDPTRYLNESRDDKEEMKPVISGEASTSSHQGSSEAQLSKADKFEIMKDVYSKGKMDGFLEALAQKDINRHLFEGNDDSHAKESSISDSKICADIGNEGCKDVSILKKRVAGLKKKEEELLSLSNAATEEFRNSKDIQVLMRGIYLNGRRDGVLEVLATFLFEKNEENDSKDEPTNFEFTDEMKPAVGVGEASTSDHQGSSEAQDSHAEQDEILTGIFMNGMAAGLRVAQSSFPSLDIATTIISAYNRGEWVRLSVPVSEVEMKIYMEGVINGLLEAKVSFPTLKEWEILNTVLRKKGHNIMCQTMDWTEIVVPSSDVPLLESFMMMKQGGCDSVRAESFCKFLEEHNALRKKIEEIENESATTDNSKKGHSLDEKLATILKGRAEEVQMDSYCPTYSIQNSKEIQDLMTATYSNGMRDGLLEARAILLALNMDIITHEFEWNENEISAQGNDSRILPSKNQYGNFLEKLNTQFGEHISKKDHTFDGNDDSCAKESSISDSKIRTDIGKEGCEDVSKQKKLAAVLKEREEELLNLYDAEIEEFQNSEEIQDLMSVTYLNGLRDGVLEAQASLLSWFEKNEENDSKL 1566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03169 1566 MobiDBLite consensus disorder prediction 1002 1018 - -
Trre9g03169 1566 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 449 IPR027417 -
Trre9g03169 1566 Pfam TIR domain 13 156 IPR000157 GO:0007165
Trre9g03169 1566 SUPERFAMILY L domain-like 492 838 - -
Trre9g03169 1566 MobiDBLite consensus disorder prediction 988 1018 - -
Trre9g03169 1566 Pfam NB-ARC domain 197 438 IPR002182 GO:0043531
Trre9g03169 1566 SMART till_3 12 153 IPR000157 GO:0007165
Trre9g03169 1566 Gene3D Ribonuclease Inhibitor 547 861 IPR032675 -
Trre9g03169 1566 PRINTS Disease resistance protein signature 294 308 - -
Trre9g03169 1566 PRINTS Disease resistance protein signature 695 711 - -
Trre9g03169 1566 PRINTS Disease resistance protein signature 217 232 - -
Trre9g03169 1566 PRINTS Disease resistance protein signature 389 403 - -
Trre9g03169 1566 ProSiteProfiles TIR domain profile. 11 182 IPR000157 GO:0007165
Trre9g03169 1566 Gene3D - 354 439 IPR042197 -
Trre9g03169 1566 Gene3D - 7 183 IPR035897 -
Trre9g03169 1566 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 789 IPR044974 GO:0006952
Trre9g03169 1566 FunFam Disease resistance protein (TIR-NBS-LRR class) 9 183 - -
Trre9g03169 1566 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 155 IPR035897 -
Trre9g03169 1566 Coils Coil 1506 1526 - -
Trre9g03169 1566 Coils Coil 1327 1347 - -
Trre9g03169 1566 Gene3D - 184 347 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03169 Trre-Chr9 40093291 40099498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03169 4 810 WRKY Transcription Factor Family AT4G12020 29.545 7.09e-81 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03169 - - tpra:123882297 1243.02