Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03154 ATGGCAGCTTCAGTTGACAACCGTCAGTTTCGTAACCTAAACGGCGTCGTTCGTCCTTTCAATACAAGCAACAATTTCATCCATGACCTGAAACCGGGTTTCCCGGTAAACATAGATTCCTTCAGCAGTGACGACGAAGAAAACGACGACGTATCAGATCTCGAAGAATTAATCAGAAAAACAAACGCTGAAGTTGAACCGTCAATTCTCGACCCACGCGATGAAGGAACGTTGGATAACTGGGTAACACGAAACTCTTCCATGATCCGTCTCACAGGGAAACATCCATTCAATTCAGAACCACCACTTCCACGTCTCATGCACCACGGTTTCATAACACCAGTTCCAATCCACTACGTTAGAAACCACGGTTCAGTCCCAAAAGCACGTTGGGAAGATTGGACCGTTGAAGTAACCGGTTTAGTAAAAAACCCAACCCGGTTCACTATGGACCGACTCGTTCGCGAGTTTCCAAGCCGCGAATTTCCCGTTACATTAGTCTGTGCTGGTAACCGTCGAAAAGAACAAAACATGGTGAAACAAAGTGTTGGTTTCAATTGGGGTGCTGCAGCAGTTTCAAATTCCGTATGGCGTGGTGTTTCGTTGCGTCACGTGCTTAAAAAGTGTGGGATACACGCGCGTTCTAAAGGTGCGGTTCATGTTTGTTTTTATGGTGCTGAGGATTTACCTGGTGGTGGTGGGTCTAAATATGGAACTAGTATTAAGAGAGAATATGCGATGGATCCTTCGCGTGATGTTATTCTTGCTTACATGCAAAATGGTGAAGCTTTGACCCCGGATCATGGGTTTCCGGTTCGGGTTATTATACCCGGTTTTATTGGTGGACGTATGGTGAAATGGCTTAAACGTATTGTTGTTACTTCTGAAGAATGTGATGGTCACTATCATTATAAAGATAATAGAGTACTTCCATCTCATGTTGATGCAGAACAAGCCAATGAAGAAGGTTGGTGGTATAAGCCGGAATATATCATTAACGAGCTAAATATAAACTCGGTGATTACAACGCCGTGTCATGATGAGATCTTGCCTATAAATTCATGGACTACACAGAGGCCTTATACACTGAAAGGTTATTCATATTCTGGGGGTGGAAGAAAAGTGACACGGGTTGAGGTAACAATGGATGGTGGAGAAACATGGCACGTGTGTACATTGGATCATCCTGAAAAACCAACAAAATACGGGAAATATTGGTGCTGGTGCTTTTGGTCTTTAGAAGTAGAGGTACTCGACCTTCTTGGTACCAAAGAGATTGCTGTCCGTGCATGGGATGAGGCTCTAAACACCCAACCTGAAAACCTCATTTGGAATGTTATGGGCATGATGAACAATTGTTGGTTTAGGGTAAAAACAAACGTGTGCAGGCCCCACAGAGGTGAAATAGGCATAGTGTTTGAACATCCAACACAACCAGGTAACCAATCAGGTGGTTGGATGGCAAAAGAAAGACACTTAGAAAGATCACAAGATACAAATCCAACTCTCAAAAAGAGTGTCTCTTCTCCATTCATGAACACAACATCAAAAACATACTCAATCTCCGAAGTTAAAAAACATAAAACCCCTGATTCTGCTTGGATTATCGTCCACGGTCATGTCTACGATTGCACTCGCTTCCTTAAAGACCATCCAGGTGGCTCCGATAGTATTCTCATCAATGCCGGTACTGATTGTACCGATGAATTTGAAGCTATCCACTCTGACAAAGCCAAAAAATTGCTAGAAGATTACCGAATTGGCGAGCTTGTTACTACCGGTTACGCTTCAGATTCATCCTCCCCAAATACCTCATTTCATGGGAATACCGAATTTTCCCATCTTGCCCCAATTAAAGAAATCATGGCTCTTAACCCACGTGAGAGAATCCCATGCAAGCTTGTTTCAAAAACATCAATTTCACATGATGTAAGATTGTTCCGTTTTGCATTACCTTCTGAAGATCAATTATTGGGATTACCCGTCGGTAAACACATTTTCTTATGCGTTACCGTCGAAGGAAAATTGATCATGCGAGCTTATACGCCAACAAGTAGCGTCGATGAAATTGGATATTTTGATTTAGTTGTCAAAATTTACTTCAAAAATGTTCATCCCAAGTTTCCTAATGGTGGAATCATGTCTCAATATTTGGACTCACTTACCATTGGGTCGATATTAGAAGTAAAAGGCCCAGTGGGCCACATTGAATATCTTGGAAGAGGAAATTTTACGGTTCACGGGAAACAACGGTTTGCCAAGAAGCTAACATTTTTAGCTGGTGGAACCGGGATCACACCCGTTTATCAAGTGGCGAATGCGATTCTAAAGGATGCCAATGATCGAACTGAAATGTATGTTGTTTATGCGAACCGGACCGAGGATGATATATTATTGAGGGAAGAGTTGGATGAGTGGGCAAAGATTTATAGTGATAGGTTCAAGATATGGTATGTTGTGGAAAATGCAAAGGAAGGGTGGGAATACAGTGTGGGGTTCATTACGGAAAGTATCATGAGGGAGCATGTTCCATTGGCTGGTGAGGATACTTTGGCTTTGGCTTGTGGACCACCACCTATGATTCAATTTGCAGTGCAGCCTAATTTGGAAAAAATGGGGTATGATATTAAGAAGGATTTGCTTGTGTTTTAG 2652 0.4242 MAASVDNRQFRNLNGVVRPFNTSNNFIHDLKPGFPVNIDSFSSDDEENDDVSDLEELIRKTNAEVEPSILDPRDEGTLDNWVTRNSSMIRLTGKHPFNSEPPLPRLMHHGFITPVPIHYVRNHGSVPKARWEDWTVEVTGLVKNPTRFTMDRLVREFPSREFPVTLVCAGNRRKEQNMVKQSVGFNWGAAAVSNSVWRGVSLRHVLKKCGIHARSKGAVHVCFYGAEDLPGGGGSKYGTSIKREYAMDPSRDVILAYMQNGEALTPDHGFPVRVIIPGFIGGRMVKWLKRIVVTSEECDGHYHYKDNRVLPSHVDAEQANEEGWWYKPEYIINELNINSVITTPCHDEILPINSWTTQRPYTLKGYSYSGGGRKVTRVEVTMDGGETWHVCTLDHPEKPTKYGKYWCWCFWSLEVEVLDLLGTKEIAVRAWDEALNTQPENLIWNVMGMMNNCWFRVKTNVCRPHRGEIGIVFEHPTQPGNQSGGWMAKERHLERSQDTNPTLKKSVSSPFMNTTSKTYSISEVKKHKTPDSAWIIVHGHVYDCTRFLKDHPGGSDSILINAGTDCTDEFEAIHSDKAKKLLEDYRIGELVTTGYASDSSSPNTSFHGNTEFSHLAPIKEIMALNPRERIPCKLVSKTSISHDVRLFRFALPSEDQLLGLPVGKHIFLCVTVEGKLIMRAYTPTSSVDEIGYFDLVVKIYFKNVHPKFPNGGIMSQYLDSLTIGSILEVKGPVGHIEYLGRGNFTVHGKQRFAKKLTFLAGGTGITPVYQVANAILKDANDRTEMYVVYANRTEDDILLREELDEWAKIYSDRFKIWYVVENAKEGWEYSVGFITESIMREHVPLAGEDTLALACGPPPMIQFAVQPNLEKMGYDIKKDLLVF 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03154 883 CDD eukary_NR_Moco 74 459 - -
Trre9g03154 883 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 516 591 IPR001199 -
Trre9g03154 883 Pfam Oxidoreductase NAD-binding domain 758 865 IPR001433 GO:0016491
Trre9g03154 883 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 726 875 IPR039261 -
Trre9g03154 883 PRINTS Cytochrome B5 reductase signature 757 776 - -
Trre9g03154 883 PRINTS Cytochrome B5 reductase signature 679 686 - -
Trre9g03154 883 PRINTS Cytochrome B5 reductase signature 724 738 - -
Trre9g03154 883 PRINTS Cytochrome B5 reductase signature 658 669 - -
Trre9g03154 883 PRINTS Cytochrome B5 reductase signature 795 806 - -
Trre9g03154 883 PRINTS Cytochrome B5 reductase signature 851 859 - -
Trre9g03154 883 Pfam Oxidoreductase molybdopterin binding domain 123 302 IPR000572 -
Trre9g03154 883 FunFam Nitrate reductase 75 324 - -
Trre9g03154 883 PIRSF Nitr_rd_NADH 13 882 IPR012137 GO:0006809|GO:0042128|GO:0050464
Trre9g03154 883 Pfam Cytochrome b5-like Heme/Steroid binding domain 522 590 IPR001199 -
Trre9g03154 883 Pfam Oxidoreductase FAD-binding domain 632 738 IPR008333 -
Trre9g03154 883 PRINTS Cytochrome B5 signature 578 590 IPR001199 -
Trre9g03154 883 PRINTS Cytochrome B5 signature 551 565 IPR001199 -
Trre9g03154 883 PRINTS Cytochrome B5 signature 541 551 IPR001199 -
Trre9g03154 883 PRINTS Cytochrome B5 signature 566 573 IPR001199 -
Trre9g03154 883 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 627 739 IPR017927 GO:0016491
Trre9g03154 883 FunFam NADH-cytochrome b5 reductase 618 733 - -
Trre9g03154 883 FunFam Nitrate reductase [NADH] 734 883 - -
Trre9g03154 883 SMART Cyt_b5_2 519 591 IPR001199 -
Trre9g03154 883 SUPERFAMILY E set domains 334 461 IPR014756 -
Trre9g03154 883 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 514 594 IPR036400 -
Trre9g03154 883 Gene3D - 334 509 - -
Trre9g03154 883 Gene3D - 512 594 IPR036400 -
Trre9g03154 883 PANTHER SULFITE REDUCTASE 62 463 - -
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 89 103 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 164 175 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 248 264 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 281 294 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 363 377 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 190 205 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 377 389 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 111 127 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 404 414 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 442 455 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 429 441 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 175 187 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 265 278 IPR008335 GO:0016491
Trre9g03154 883 PRINTS Eukaryotic molybdopterin domain signature 332 344 IPR008335 GO:0016491
Trre9g03154 883 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 140 175 IPR022407 GO:0043546
Trre9g03154 883 CDD cyt_b5_reduct_like 632 883 - -
Trre9g03154 883 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 547 554 IPR018506 GO:0020037
Trre9g03154 883 Gene3D - 734 883 IPR039261 -
Trre9g03154 883 SUPERFAMILY Riboflavin synthase domain-like 621 739 IPR017938 -
Trre9g03154 883 Gene3D Translation factors 619 733 - -
Trre9g03154 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 827 843 IPR001709 GO:0016491
Trre9g03154 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 711 720 IPR001709 GO:0016491
Trre9g03154 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 550 560 IPR001709 GO:0016491
Trre9g03154 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 851 859 IPR001709 GO:0016491
Trre9g03154 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 757 776 IPR001709 GO:0016491
Trre9g03154 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 783 792 IPR001709 GO:0016491
Trre9g03154 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 795 806 IPR001709 GO:0016491
Trre9g03154 883 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 679 686 IPR001709 GO:0016491
Trre9g03154 883 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 71 332 IPR036374 -
Trre9g03154 883 FunFam Nitrate reductase 512 593 - -
Trre9g03154 883 Pfam Mo-co oxidoreductase dimerisation domain 330 461 IPR005066 GO:0016491|GO:0030151
Trre9g03154 883 FunFam Nitrate reductase 334 510 - -
Trre9g03154 883 Gene3D - 73 324 IPR036374 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03154 Trre-Chr9 39935233 39940560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03154 619 874 NADPH P450 reductases AT5G17770 39.535 2.05e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03154 K10534 - gmx:100813471 1506.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03154 9 39935233 39940560 Trre9g03154 9 39935233 39940560 ECH