Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03145 ATGTTTGAAACTGAATATGAAAGTTGGGTTGAAGAACAAAGTAGACAAAATGAAGAACTAAGAAATGCATTGCAAACTAATGCATCTTATATACAACTTCAACTCCTTGTTGAAAGTAGCTTGAACCAATACTCAAATCTTTTCAGAATGAAAGCAGAAGCCGCGAAGGCTGATGTTTTTTATTTAATCTCGGGAACATGGAAGGCGCCGGTAGAACGCCTTTTTCTTTGGATCGGAGGATACCGTCCATCACAGCTTCTAAATATCGTTGTACCGAAGCTTGATGCTTTAACTGATGCACAAATGGTTAGCATTAACAACCTCTGTATATCGACTCTGCAAACTGAAGATGCTCTATCACAAGGGTTAGAGAAGCTCCAGCAAACAATGATAAAAAACATTCAAGCTGATTCTTTGGATTTTGGATACTATGGCTTTCACGTCGCTGCTGCCATTGACAAAGGAGAAGTCGTCGAAAGTTTTGTAAATCAGGCTGATCACCTTAGGCACCAAGCTTTGTTGTTCATGTCTCGCATCCTGACAATTGGGCAGGCTGCTCAAGGCTTGCTGGCTATGGGGGACTACTTTCAACGTCTTCGCGCTCTTAGTTCTTTGTGGACTGCACGTTCATGTGATTATTTCTACCCTACTCAACATTCAACTTAG 666 0.4114 MFETEYESWVEEQSRQNEELRNALQTNASYIQLQLLVESSLNQYSNLFRMKAEAAKADVFYLISGTWKAPVERLFLWIGGYRPSQLLNIVVPKLDALTDAQMVSINNLCISTLQTEDALSQGLEKLQQTMIKNIQADSLDFGYYGFHVAAAIDKGEVVESFVNQADHLRHQALLFMSRILTIGQAAQGLLAMGDYFQRLRALSSLWTARSCDYFYPTQHST 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03145 221 PANTHER TRANSCRIPTION FACTOR TGA9 1 210 - -
Trre9g03145 221 Pfam Seed dormancy control 18 91 IPR025422 GO:0006351|GO:0043565
Trre9g03145 221 ProSiteProfiles DOG1 domain profile. 1 209 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03145 Trre-Chr9 39771394 39772394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03145 2 209 Calmodulin-binding Proteins AT1G77920 57.895 4.76e-83 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03145 K14431 - mtr:112421960 318.161