Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03105 ATGAGAGAACAAAGAGTCCTTCATATTGAAGATACTACTCAAATTGAGAGATCTAAGTGGGTTTTGGATTCTCCTAATCCACCACCATTATGGAAAAAAATATTTACTTCATTGAAAGAGACCCTTTTGCCTCATGGAAACAAATTGTGTTTATCATCCAAGAACAAAACTTTTTATGGACATGCTTACTCTTTCTTGCAGAATTTGTTTCCAATCCTTGTTTGGTTTAAAGATTATACTTTATCCAAATTTAAAGATGATTTGTTAGCTGGTTTAACTCTTGCCAGCCTTTGCATACCTCAGAGTATAGGATATGCAAGTTTGGCAAAAGTTGATCCTCAATATGGCCTGTATACCAGTATTGTTCCTCCTCTTATCTATGCTGTGATGGGGAGCTCAAGAGACATTGCAATTGGACCTGTAGCTGTAGTGTCTATGCTGTTATCTTCATTGGTTACAAAAGTCATAGATCCTGTTGCTAATCCTCATGCCTATAGAGATTTTGTCTTTACTGTCACCTTCTTTACTGGAATTTTTCAAGCTGCATTCGGTATTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCACTAGTTGGATTTATGGCTGGAGCAGCTCTTATTATTGGTCTTCAGCAGCTCAAGGGTCTTTTGGGGATTACTCACTTCACCACCAAAACAGATGCAATATCAGTACTGGTGTCTGTTTATAAGTCATTACATGAACAAATTACTTCTGAAGAAGAAAAATGGAGCCCTCTGAATTTTGTCCTTGGCTGTTCTTTCTTGATTTTCCTTCTAGTTACCCGTTTTATAGCAAGAAAAAAGAAGAAACTTTTCTGGTTGCCTGCTATTGCTCCTCTTCTATCAGTTATACTATCAACTTTAATCGTGTATTTATCGAAAGCTGATAAACAAGGAGTTAATATAATAAAGCATGTCAAAGGAGGCTTGAATCAGAGTTCAGTTCATCAGTTACAATTCCATGGTCAAAATGTCGGTCAAGCGGCCAAAATCGGATTAGTTTGTGCAGTTATCGCCCTCACTGAAGCAATGGCTGTTGGTCGATCTTTCGCTTCCATTAAGGGATACCAACTTGATGGGAATAAAGAAATGTTCTCAATGGGAATCATGAACATTGCAGGATCATTATCTTCATGCTATGTCGCAACTGGATCGTTTTCGAGGACAGCGGTTAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCATTAACTGTGATTTTGTTCCTTCAATTATTTGCAAGGCTCTTATACTACACACCTATGGCTATCCTTGCTGCTATAATCCTCTCTGCACTTCCTGGATTAATCGATATTAACGAGGCTCGCTATATTTGGAAAGTCGACAAATTAGACTTTCTTGCCTGTATTGGCGCTTTTGTTGGCGTCTTGTTTGCATCCGTAGAGATTGGTCTTCTTGTTGCAGTGACAATCTCATTTGCGAAGATACTGATACAATCAATTCGACCTGGAGTAGAAATTCTCGGAAGAGTTCCAAGAACAGAAGCCTTCTGTGATGTTACTCAATATCCGATGGCCACAAGCACACCAGGCATCATAGTGATCCGCATAAGTTCCGGCTCACTCTGCTTCGCAAATGCCAATTTTGTCAAAGAAAGAATACTGAAGTGGGTCGTGGAAGAAGATGACATTCAAGAAACTTCCAAGGGAAATGTCCGAGCCATAATTATGGACATGACTAACTTGATGAATGTTGATACTTCTGGAATTCTAGCACTAGAGGAATTACATAAGAGGCTGCTTTCACGCGGCGTAGAATTAGCTATGGTCAACCCAAGATGGCTAGTAATTCATAAGCTCAAGCTTGCACACTTTGTGGACAAAATAGGGAAACAATGGGTTTTTCTGACTGTTGGAGAGGCCGTAGACGCGTGTCTCGCTTCTAAAATCGCTACCGCTTGA 1965 0.3954 MREQRVLHIEDTTQIERSKWVLDSPNPPPLWKKIFTSLKETLLPHGNKLCLSSKNKTFYGHAYSFLQNLFPILVWFKDYTLSKFKDDLLAGLTLASLCIPQSIGYASLAKVDPQYGLYTSIVPPLIYAVMGSSRDIAIGPVAVVSMLLSSLVTKVIDPVANPHAYRDFVFTVTFFTGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAALIIGLQQLKGLLGITHFTTKTDAISVLVSVYKSLHEQITSEEEKWSPLNFVLGCSFLIFLLVTRFIARKKKKLFWLPAIAPLLSVILSTLIVYLSKADKQGVNIIKHVKGGLNQSSVHQLQFHGQNVGQAAKIGLVCAVIALTEAMAVGRSFASIKGYQLDGNKEMFSMGIMNIAGSLSSCYVATGSFSRTAVNFSAGCQTAVSNIVMALTVILFLQLFARLLYYTPMAILAAIILSALPGLIDINEARYIWKVDKLDFLACIGAFVGVLFASVEIGLLVAVTISFAKILIQSIRPGVEILGRVPRTEAFCDVTQYPMATSTPGIIVIRISSGSLCFANANFVKERILKWVVEEDDIQETSKGNVRAIIMDMTNLMNVDTSGILALEELHKRLLSRGVELAMVNPRWLVIHKLKLAHFVDKIGKQWVFLTVGEAVDACLASKIATA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03105 654 PANTHER SULFATE TRANSPORTER 55 647 IPR001902 GO:0016020|GO:0055085
Trre9g03105 654 FunFam Sulfate transporter 31 503 649 - -
Trre9g03105 654 Gene3D STAS domain 503 649 IPR036513 -
Trre9g03105 654 SUPERFAMILY SpoIIaa-like 529 646 IPR036513 -
Trre9g03105 654 ProSiteProfiles STAS domain profile. 540 646 IPR002645 -
Trre9g03105 654 Pfam Sulfate permease family 84 471 IPR011547 GO:0016020
Trre9g03105 654 Pfam STAS domain 524 642 IPR002645 -
Trre9g03105 654 NCBIfam sulfate permease 71 642 IPR001902 GO:0016020|GO:0055085
Trre9g03105 654 CDD STAS_SulP_like_sulfate_transporter 524 639 - -
Trre9g03105 654 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03105 Trre-Chr9 39451541 39455949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03105 14 651 Inorganic Solute Cotransporters AT5G10180 62.402 0.0 826
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03105 K17469 - gmx:100776591 1073.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03105 9 39451541 39455949 Trre5g02287 5 17310221 17315510 PCT