Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03103 ATGAGTCAACCAGCTGATGAAAATGTTGAAACAAAAGAGATGGATAGTAGAAGTTTGTCTTCTTCACAAGGTCAGGAACCATACGTGCACAAGGTTGGAGTTCCTCCAAAACAAAACCTCTTCAAGGAATTCCAATACACTGTAAAAGAAACATTTTTCTCGGACGATCCTCTACGGCCTTTTAAGGATCAGACGAAGTCCCGGAAGTTCGTCCTGGGAATTGAAGCTATATTCCCTATACTTAGTTGGGGAAGAACTTATAACCTCAAAAAGTTTAGAGGAGATCTTATTGCCGGTTTAACTATTGCAAGTCTCTGCATTCCTCAGGATATTGGATACTCAAAGCTTGCAAATTTGTCTCCTCAGTATGGACTGTATTCAAGCTTTGTTCCACCGCTGATATATGCGGTCATGGGTAGTTCACGTGACATTGCGATAGGACCAGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTACTCCAGAATGAAATTGATCCCAATACACATCCAACGGAATATAGAAGACTCGCTTTTACTGCCACGTTTTTTGCTGGGATTACACAGGCAATTCTTGGAGTTTTTAGGTTAGGATTTTTGATTGATTTCCTATCTCATGCTGCAATTGTCGGTTTTATGGGGGGAGCTGCCATCACAATTGCTCTTCAACAGCTTAAGGGTTTCCTTGGGATTGAAAAGTTCACAAGGAAAACCGATATAATCTCTGTGATGCATTCAGTATTCTCATCAGCCCATCATGGATGGAACTGGCAAACTATATTAATTGGATCTACCTTTCTTTCTTTTCCTCTGTTTGCCAAGTATATCGGAAAGAAGGGCCAGAAATTCTTCTGGGTTCCAGCAATTGCTCCATTGATATCTGCTGTACTCTCCACTTTATTTGTATACATAACCCGTGCAGACAAACACGGTGTTGCAATTGTAAAACACATAGAGAAAGGGATAAATCCATCCTCCGTGAAGGAAATTTATTTTACTGGTGGCTACCTTGCGAAAGGTGTTAGAATTGGCATTGTGGCTGGCATGATAGCTTTAACTGAAGCCATAGCAATTGGAAGAACATTTGCGTCTATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTGGCCTTAGGAGCTATGAATGTTGTTGGTTCAATGACTTCCTGTTATGTAGCAACTGGTTCTTTCTCTCGGTCAGCGGTAAATTACATGGCTGGCTGCGAAACTGCGGTCTCTAATATTGTCATGTCTGTTGTTGTGTTCTTAACCCTTCAATTTTTCACGCCTCTTTTCAAATACACTCCAAATGCCATTCTTGCTTCAATCATCATTTGCGCCGTCATCAACCTTGTAGACTATAAGGCAGCAATTTTGATATGGAAAATTGATAAATTTGACTTTGTTGCTTGCATGGGAGCATTTTTCGGGGTTGTTTTTGCCTCGGTTGAGATAGGACTTTTGATTGCTGTTTCTATATCCTTTGCAAAAATCCTATTGCAAGTCACGAGGCCTCAAACTGCTATTCTGGGGAAGATTCCTAGGACAACTGTTTATAGAAACATCCAGCAATATCCAGAGGCAACAAGGGTTCCTGGTGTACTGATTATAAGAGTTGATTCTGCAATATATTTTTCCAACTCTAATTATGTTAAAGAAAGGATACTAAGATGGCTTATGGATGAGGAAGAACGAGTGAATAGAGACTATCAAACTCGAATCCAGTTTTTGATAGTTGAGATGTCACCTGTTACCGACATTGATACTAGTGGCATCCATGCCCTGGAAGAGTTATTTAGAAGTCTTCAGAAGAGAGAGGTTCAGCTTGTACTTGCAAATCCTGGTCCACTAGTGATAGACAAACTCCACACATCAAACTTTGCAAATTTTCTTGGTGAAGACAAGATCTTCCTCACTGTTGCTGAGGCTGTTGCATACTGTTCTCCAAAGCTGGCTGAGGAACCTTGA 1968 0.408 MSQPADENVETKEMDSRSLSSSQGQEPYVHKVGVPPKQNLFKEFQYTVKETFFSDDPLRPFKDQTKSRKFVLGIEAIFPILSWGRTYNLKKFRGDLIAGLTIASLCIPQDIGYSKLANLSPQYGLYSSFVPPLIYAVMGSSRDIAIGPVAVVSLLLGTLLQNEIDPNTHPTEYRRLAFTATFFAGITQAILGVFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIEKFTRKTDIISVMHSVFSSAHHGWNWQTILIGSTFLSFPLFAKYIGKKGQKFFWVPAIAPLISAVLSTLFVYITRADKHGVAIVKHIEKGINPSSVKEIYFTGGYLAKGVRIGIVAGMIALTEAIAIGRTFASMKDYQLDGNKEMVALGAMNVVGSMTSCYVATGSFSRSAVNYMAGCETAVSNIVMSVVVFLTLQFFTPLFKYTPNAILASIIICAVINLVDYKAAILIWKIDKFDFVACMGAFFGVVFASVEIGLLIAVSISFAKILLQVTRPQTAILGKIPRTTVYRNIQQYPEATRVPGVLIIRVDSAIYFSNSNYVKERILRWLMDEEERVNRDYQTRIQFLIVEMSPVTDIDTSGIHALEELFRSLQKREVQLVLANPGPLVIDKLHTSNFANFLGEDKIFLTVAEAVAYCSPKLAEEP 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03103 655 FunFam Sulfate transporter 31 504 650 - -
Trre9g03103 655 MobiDBLite consensus disorder prediction 1 31 - -
Trre9g03103 655 Pfam STAS domain 525 643 IPR002645 -
Trre9g03103 655 CDD STAS_SulP_like_sulfate_transporter 525 640 - -
Trre9g03103 655 ProSiteProfiles STAS domain profile. 524 647 IPR002645 -
Trre9g03103 655 ProSitePatterns SLC26A transporters signature. 121 142 IPR018045 GO:0008271|GO:0008272
Trre9g03103 655 PANTHER SULFATE TRANSPORTER 38 648 IPR001902 GO:0016020|GO:0055085
Trre9g03103 655 Pfam Sulfate permease family 92 472 IPR011547 GO:0016020
Trre9g03103 655 NCBIfam sulfate permease 79 643 IPR001902 GO:0016020|GO:0055085
Trre9g03103 655 SUPERFAMILY SpoIIaa-like 526 648 IPR036513 -
Trre9g03103 655 Gene3D STAS domain 504 651 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03103 Trre-Chr9 39433088 39437436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03103 2 654 Inorganic Solute Cotransporters AT1G22150 77.182 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03103 K17470 - gmx:100797668 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g03103 9 39433088 39437436 Trre5g02291 5 17338541 17342177 PCT