Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g03027 ATGTGTATGACCATCGAAAATGAGCATCAGTTTTCATCATTTGCTGAAATTAATTCAACTAGGTCAAGTTGGAATTGTAGGGCAAAGATCATCCGACTTTGGCAAACTTCTAATTTCAATCGAAACACATTGCCTTTTTCTATTGAAATGGTTTTAATGGATTCTTATGGTGGTAGAATTCATGGTACAGTTAAAACAACTCTTATTTATAAATTTAAGGATGAGTTAATAGAGGGAAAAGTTTATACTTTTGAAAAGATAGAGGTCTCACCTAATGTTGGAGATTATCGTACTACTCATCACAGTTTTAAGTTAAATTTCAAAGGCACTACATTGGTTCAAAGACTTTTTAATCAAGACATTGTTAGATCTCCATATAACTTTGTTCCAGTTGGACAGATTGTTGGAGGCTCCTATGACACTGATTTCTTAGTTGATGTTATTGGAATATTGATTGATGTTGGTCGTGAGCGTGAAATTAATGATCAAGATGGAACGCTCACAAAAGTGAATGTCATTGAAATAGAGGAAGATGAGAGTAAGATTCAATGTTATTTGTATGGGGCATATGTTGATGTACTTAATGCTTTTCTTGGAGCTGAACATGTCCAAAATGTTGCTGTCGTTATGATGTTTGCCAAGGCCGTAGCTTTTCAAGATTGCAAGATTCATATTCAAAATTGTCTCAACTCTACCTATTTGTCCTTTAACCCTTTCTAA 720 0.3403 MCMTIENEHQFSSFAEINSTRSSWNCRAKIIRLWQTSNFNRNTLPFSIEMVLMDSYGGRIHGTVKTTLIYKFKDELIEGKVYTFEKIEVSPNVGDYRTTHHSFKLNFKGTTLVQRLFNQDIVRSPYNFVPVGQIVGGSYDTDFLVDVIGILIDVGREREINDQDGTLTKVNVIEIEEDESKIQCYLYGAYVDVLNAFLGAEHVQNVAVVMMFAKAVAFQDCKIHIQNCLNSTYLSFNPF 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g03027 239 SUPERFAMILY Nucleic acid-binding proteins 126 226 IPR012340 -
Trre9g03027 239 Gene3D - 9 115 IPR012340 -
Trre9g03027 239 Pfam Domain of unknown function DUF223 49 144 IPR003871 -
Trre9g03027 239 SUPERFAMILY Nucleic acid-binding proteins 10 117 IPR012340 -
Trre9g03027 239 CDD RPA1_DBD_A_like 27 113 - -
Trre9g03027 239 Gene3D - 119 239 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g03027 Trre-Chr9 38602927 38603905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g03027 3 238 Core DNA Replication Machinery Family AT2G06510 22.131 2.43e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g03027 - - tpra:123915358 295.434