Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02953 ATGGCCCAACCCAAAGGTACCCAGGCCCTATTAGCCCATGTTTCTTCCTCCCAACGAAACCGTGTTACTGGTTCATTGACCCTTGAAGCTGAACGACCAAGTACGAATTCAAAGTTCAACAACACAAGTATCTATCTATCTACCAATCAAAATATCTTAGCTCTTCCTCTTCTTCCCTACATCCTTGGAGTTGGATTTCAATCACAAATAAACATGCCAACCCTCTCCAATTTCTACACCATTCAAGATGTATCCCAACACAAATCCAAAGATGATTGCTGGATCATTGTTGATGGAAAGGTATATGATGTGACAAAATATTTGGATGATCATCCTGGTGGAGATGATGTTATCCTCGAAGCAACCGGGAGAGATGCAACTGAGGATTTTGAAGATGCTGGCCACAGCAAAAGTGCAAGAGAACTTATGGAGCAGTATTATATTGGTGAGTTTGACACGTCGTCTCCGATTGCAACCAAGAAAAGTTTTTCTGAAAGGTTTGCACAGCTGAAAAAGAAACAATATTTGGGACTTTCGGTAGCTGTAGTTGGCATCTCAGTGATTGCTGGTTTCTTATACTTACGGAAGAAGTAA 594 0.4125 MAQPKGTQALLAHVSSSQRNRVTGSLTLEAERPSTNSKFNNTSIYLSTNQNILALPLLPYILGVGFQSQINMPTLSNFYTIQDVSQHKSKDDCWIIVDGKVYDVTKYLDDHPGGDDVILEATGRDATEDFEDAGHSKSARELMEQYYIGEFDTSSPIATKKSFSERFAQLKKKQYLGLSVAVVGISVIAGFLYLRKK 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02953 197 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 107 114 IPR018506 GO:0020037
Trre9g02953 197 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 76 152 IPR001199 -
Trre9g02953 197 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 75 162 IPR036400 -
Trre9g02953 197 SMART Cyt_b5_2 79 152 IPR001199 -
Trre9g02953 197 Pfam Cytochrome b5-like Heme/Steroid binding domain 81 151 IPR001199 -
Trre9g02953 197 Gene3D - 72 156 IPR036400 -
Trre9g02953 197 PRINTS Cytochrome B5 signature 111 125 IPR001199 -
Trre9g02953 197 PRINTS Cytochrome B5 signature 101 111 IPR001199 -
Trre9g02953 197 PRINTS Cytochrome B5 signature 126 133 IPR001199 -
Trre9g02953 197 PRINTS Cytochrome B5 signature 139 151 IPR001199 -
Trre9g02953 197 FunFam Cytochrome b5 type B 74 156 - -
Trre9g02953 197 PANTHER CYTOCHROME B5 70 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02953 Trre-Chr9 37430851 37435227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02953 72 196 NADPH P450 reductases AT1G26340 50.000 7.69e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02953 K23490 - gmx:100500537 189.119