Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02950 ATGGAAGAAAGACAAGGCCAGTATTATCTTTCCAGTCCACCTGAGTCTGATTTTAACAGGCAAGTGAATCGCAGGGCTAGTATAACAGGCCTGAAGCAGAGAGGTCATGGAAGTCGCTCTTGGATTAAAATTGATCAGGATGGAAATTCTGAGATTGTGACACTTGACAAGGCTACTATTATGAGACATTGTTCTTTGCCTTCTAGAGATCTTCGACTATTAGATCCAAAGTTCATTTATCCTTCTTCAATATTAGGAAGGGAGATGGCTATTGTAGTCAACCTTGAGCAGATCCGGTGTATAATCACCGCCGACGAAGTCATCCTCATGAATTCACTGGATGGTACTGTTGGTCGGTACAGGTCACAATTATGCAATCGGCTCCGGAGAGAAAAATCTGATGATCTTCCCTTTGAATTTAGGGCACTGGAGTTAGCTCTGGAATTGACATGCACATCATTAGATGCTCAGGTAAATGAACTAGAGTTGGAAATATATCCCGTCCTCGATGAACTAGCCTCATCTATCAGTACTCTCCTTCTGGAACGTGTTCGAAGATTTAAAGGTCACCTCCTTTCACTGACTCAGCGTGTTCAGAAGGTTCGTGATGAAATAGAACATCTCATGGATGACGATGGTGACATGGCTGAGATGTGCCTGACTGAAAAAAGGAGAAGATCAGATGCTTCTTTTTCAAATGATTGTTTTCAAACTCGTATTTCAAAATCAGCCCCTAATTCACCAGAGAGGTCAGTTAGTGGGCTACATATGTTGCCAAGGACTTTCAGCGGCATTGCAAATTCAAGTAAATATGGTAGTTCAACGGGTTCATCTGATAATGAAGAAAGGATTCAGCCGCTGGAGATGTTGTTGGAAGCCTACTTTATTGTCATTGATAATACTCTCAACACATTATCGTCGCTCAAAGAATACATCGATGACACGGAAGATTTTCTCAACATAAAATTGGGAAATATTCAAAACCTCCTAATAAAGTTTGAGATGCTTCTTACAGCAGCCACATTGGTAGCTGCAATATTTGCAGCCGTGGCTGGAGTATTTGGAATGAATTTTGAAACTTCTGTTTTTGACTACCCGTCTGGATTCAATTGGGTTATGGTAATTACTGGAATTGCTTGTGTAGCATTGTATTTTGCCTTACTATTCTATTTTAGATACAAAAAGGTGCTTCCAGAATAA 1200 0.405 MEERQGQYYLSSPPESDFNRQVNRRASITGLKQRGHGSRSWIKIDQDGNSEIVTLDKATIMRHCSLPSRDLRLLDPKFIYPSSILGREMAIVVNLEQIRCIITADEVILMNSLDGTVGRYRSQLCNRLRREKSDDLPFEFRALELALELTCTSLDAQVNELELEIYPVLDELASSISTLLLERVRRFKGHLLSLTQRVQKVRDEIEHLMDDDGDMAEMCLTEKRRRSDASFSNDCFQTRISKSAPNSPERSVSGLHMLPRTFSGIANSSKYGSSTGSSDNEERIQPLEMLLEAYFIVIDNTLNTLSSLKEYIDDTEDFLNIKLGNIQNLLIKFEMLLTAATLVAAIFAAVAGVFGMNFETSVFDYPSGFNWVMVITGIACVALYFALLFYFRYKKVLPE 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02950 399 Gene3D Magnesium transport protein CorA, transmembrane region 116 330 - -
Trre9g02950 399 FunFam Magnesium transporter MRS2-1 29 112 - -
Trre9g02950 399 Gene3D - 26 112 - -
Trre9g02950 399 Coils Coil 399 399 - -
Trre9g02950 399 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 335 387 IPR045863 -
Trre9g02950 399 CDD Mrs2_Mfm1p-like 41 396 IPR039204 -
Trre9g02950 399 Coils Coil 191 211 - -
Trre9g02950 399 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 26 397 IPR039204 -
Trre9g02950 399 FunFam Magnesium transporter MRS2-1 337 397 - -
Trre9g02950 399 Gene3D Magnesium transport protein CorA, transmembrane region 337 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02950 Trre-Chr9 37412610 37415041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02950 17 398 MRS2 Gene Family AT2G03620 64.141 1.47e-167 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02950 K16075 - gmx:100803935 623.624