Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02889 ATGGTTTCACTCTTTTCTCAACCCTTTGGTTCTTCTCACATTTTACCTTTTCAAAGATCCAATTTCAAGCTCAAGGTTCTTTCTTCTCAATCCTTTCCTCCCTTTCTTCCTCAACAAATTCATACTGTCAAAGACCCTTTTGCTAGAAAATTCGCAATGCGGATTCAGAGACTACCCGTACCTGTTAGCTTTGCTGAAAATGCTATCATGAGCAGTTGTGTGAAGCCATTGGTACAGAGTAACGAACCTCCGATTGTTCTTCTACATGGTTTTGATAGTTCATGTTTAGAATGGAGATATGGATATCCATTGCTCGAAGAAGCCGGTTTTGAGACCTGGGCTATTGACATTCTTGGTTGGGGATTCTCTGATTTAGAAAATCTTCCTCCTTGTGACGTGGTATCAAAGCGCAATCACTTCTATCAGTTTTGGAAGTCCTACATCAGAAGGCCAATGATATTGGTTGGTCCAAGCCTCGGCTCTGCTGTTGCCATTGACTTTGCCGTCAATTATCCAGAAGCTGTGGAAAAACTTATTTTGATTGATGCTAGTGTATATGCAGAGGGAACTGGAAACTTAGCAACCTTACCTAGATCGGTAGCATACGCTGGGGTATATTTATTGAAGAGCCTTCCGTTACGTTTATATGCCAACTATTTGACCTTCACTAACATGTCCTTAGGCACCATCCTTGATGGGACTAATGTGGGCCGCTTGCATTGCTTACTGCCTTGGTGGGATGATGCTACTGTTGATTTTATGACTAGTGGCGGTTACAAAATCGCTCCCCTCATAAGAAAGGTAAAGCAGAAAACACTGATAATATGGGGTGAAAATGACCGCATTGTCAACAATAAGCTTGCAGTGCAACTACACTGTGAATTACCTGATGCAATTCTACGCCAAATACCCGATTGTGGGCATATTCCTCATTTGGAAAGACCTGATTCAACTGTTAAATTAATTGTTGAATTTATTAAGACAGAGAAAAAGAAATTAAGTCGATGTGTTCCACAAGTAAGCCAAGTGAGCAGTTAA 1038 0.4094 MVSLFSQPFGSSHILPFQRSNFKLKVLSSQSFPPFLPQQIHTVKDPFARKFAMRIQRLPVPVSFAENAIMSSCVKPLVQSNEPPIVLLHGFDSSCLEWRYGYPLLEEAGFETWAIDILGWGFSDLENLPPCDVVSKRNHFYQFWKSYIRRPMILVGPSLGSAVAIDFAVNYPEAVEKLILIDASVYAEGTGNLATLPRSVAYAGVYLLKSLPLRLYANYLTFTNMSLGTILDGTNVGRLHCLLPWWDDATVDFMTSGGYKIAPLIRKVKQKTLIIWGENDRIVNNKLAVQLHCELPDAILRQIPDCGHIPHLERPDSTVKLIVEFIKTEKKKLSRCVPQVSQVSS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02889 345 Pfam Alpha/beta hydrolase family 85 319 IPR000073 -
Trre9g02889 345 Gene3D alpha/beta hydrolase 74 335 IPR029058 -
Trre9g02889 345 PRINTS Epoxide hydrolase signature 303 325 IPR000639 GO:0003824
Trre9g02889 345 PRINTS Epoxide hydrolase signature 89 107 IPR000639 GO:0003824
Trre9g02889 345 PRINTS Epoxide hydrolase signature 168 181 IPR000639 GO:0003824
Trre9g02889 345 PRINTS Epoxide hydrolase signature 109 124 IPR000639 GO:0003824
Trre9g02889 345 SUPERFAMILY alpha/beta-Hydrolases 81 327 IPR029058 -
Trre9g02889 345 PRINTS Alpha/beta hydrolase fold signature 109 124 IPR000073 -
Trre9g02889 345 PRINTS Alpha/beta hydrolase fold signature 168 181 IPR000073 -
Trre9g02889 345 PRINTS Alpha/beta hydrolase fold signature 272 286 IPR000073 -
Trre9g02889 345 PRINTS Alpha/beta hydrolase fold signature 154 167 IPR000073 -
Trre9g02889 345 PANTHER HYDROLASE 20 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02889 Trre-Chr9 36766340 36769542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02889 84 326 Acyl Lipid Metabolism Gene Families AT3G10840 24.204 2.25e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02889 - - cam:101505498 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02889 9 36766340 36769542 Trre9g02889 9 36766340 36769542 ECH
Trre7g02017 7 15984199 15987549 Trre9g02889 9 36766340 36769542 PCT