Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02876 ATGTCTTCTGTAACAAACCCAGTTCTCATATCAGTTCAAAGACCTCAAATTTCTTCACTTTTTTTGTTATCAAAAAGAGTTTCAACTTCAACTAGTTATGGATTGTTGAAGTCTAGAACACTTCAACATGAGGCTAAAGATTCAAGCTTATGTTTCTCTCCATTGGTGAAGGGGTTGAGATTAAGAGAGAGAAGGTTTCCAATTGTTGCAGCCTTAGCAGCAGATGCTGGTGATAGTGAAATTGGAATCACAAATGGGTCTGTCCAATCCTCAAAGAGTTTTGGAGAGAAATTTCCTGCATTGGTTACTGGTTTCTTTTTCTTTATGTGGTACTTCTTAAATGTGATTTTCAACATACTCAACAAGAAAGTCTACAATTATTTTCCATATCCATATTTTGTTTCTGTTGTACATCTCCTTGTAGGAGTGGTATATTGCCTTATCAGCTGGGGTGTAGGTCTACCAAAACGCGCACCAATGAATAAGGAACTCTTGCTTCTATTGACTCCAGTTGCATTTTGTCATGCCCTTGGTCATGTCATGTCTAATGTATCATTTGCTGCTGTTGCTGTGTCTTTTACACATACTATAAAAGCTTTGGAGCCATTTTTCAATGCTTCAGCTTCCCAGTTTGTGTTAGGCCAACATATTCCTCTCTCTTTGTGGCTATCTTTAACCCCTGTTGTTTTAGGTGTATCAATGGCATCACTAACTGAACTTTCATTCAATTGGACTGGTTTCATTAGTGCTATGATTTCAAATATAGCATTTACATACAGAAGTTTATATTCTAAGAAAGCAATGACTGGAATGGACAGTACAAATGTATATGCGTATATTTCAGTGATTGCGCTCGCCTTTTGTATCCCACCAGCAATACTTATTGAGGGACCCCAACTCATGGAATTTGGATTTAAAAATGCTATTGCCAAAGTAGGACTGATCAAGTTTTTGTCTGATCTTTTCTGGATTGGAATGTTTTATCATCTTTATAATCAGCTTGCTACTAATACTTTGGAACGTGTTGCACCATTAACACATGCAGTTGGAAATGTGTTGAAGAGAGTTTTCGTCATTGGATTCTCTATAGTGGTTTTTGGCAACAAGATCTCCACACAAACTGGCATTGGCACTGCTATTGCAATTGCAGGTGTTGCCATATATTCTCTAATAAAAGCAAATATGGAAGAGCAAAAACGGAAAGCTGCTGCTGCAGCACTTGCATCTTAA 1230 0.3748 MSSVTNPVLISVQRPQISSLFLLSKRVSTSTSYGLLKSRTLQHEAKDSSLCFSPLVKGLRLRERRFPIVAALAADAGDSEIGITNGSVQSSKSFGEKFPALVTGFFFFMWYFLNVIFNILNKKVYNYFPYPYFVSVVHLLVGVVYCLISWGVGLPKRAPMNKELLLLLTPVAFCHALGHVMSNVSFAAVAVSFTHTIKALEPFFNASASQFVLGQHIPLSLWLSLTPVVLGVSMASLTELSFNWTGFISAMISNIAFTYRSLYSKKAMTGMDSTNVYAYISVIALAFCIPPAILIEGPQLMEFGFKNAIAKVGLIKFLSDLFWIGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVVFGNKISTQTGIGTAIAIAGVAIYSLIKANMEEQKRKAAAAALAS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02876 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 238 - -
Trre9g02876 409 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 101 399 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre9g02876 409 Pfam Triose-phosphate Transporter family 102 389 IPR004853 -
Trre9g02876 409 PANTHER SOLUTE CARRIER FAMILY 35 105 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02876 Trre-Chr9 36662005 36665219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02876 50 400 Antiporters AT5G46110 75.706 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02876 K15283 - pvy:116132902 598.586