Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02864 ATGGTGAAGATTTGCTGCATTGGAGCTGGCTATGTTGGTGGTCCAACAATGGCTGTGATTGCTTTGAAGTGTCCTGAGATCGAGGTAGCTGTTGTGGATATCGCTGCGCCGAGAATCAATGCTTGGAACAGTGACCACCTTCCAATATATGAGCCTGGTCTTGATGATGTGGTGAAGGAGTGCAGAGGAAGGAACCTTTTCTTCAGCACTGATGTTGAGAAACATGTTGCTGAGGCCGATATTGTCTTTGTCTCGGTCAACACTCCTACAAAGACACAAGGTCTTGGAGCTGGCAAAGCAGCTGATCTCACTTACTGGGAGAGTGCTGCAAGAATGATTGCTGATGTTTCAAAATCAGACAAGATTGTTGTTGAGAAATCAACTGTTCCAGTCAAAACAGCCGAGGCCATTGAGAGGATTTTGACTCACAATAGGAAGGGCATTAATTTTACTATTTTGTCTAACCCTGAGTTTCTTGCTGAGGGTACAGCTATCAAAGATTTGTTCAATCCCGACCGTGTCCTTATTGGAGGCAGGGAAACCCCAGAAGGGCAAAAGGCTATTCATGCTCTGAGAGATGTTTATGCTCATTGGGTCCTATTGGATCGAATCCTTTGCACCAATTTGTGGTCTGCTGAACTCTCAAAACTTGCAGCTAATGCTTTCTTGGCTCAGAGGATTTCCTCTGTGAACGCAATGTCTGCGTTATGCGAGGCAACAGGTGCTGATGTCTCCCAGGTTTCCCACTCGATCGGAACTGACTCGAGAATTGGACCAAAATTCTTGAATGCTAGTGTTGGTTTTGGTGGATCCTGCTTTCAGAAGGATATTCTGAACTTGGTTTATATTTGCGAGTGCAATGGCCTTCCTGAGGTGGCTAACTACTGGAAACAGGTCATTAAGGTGAATGACTACCAGAAATCTCGGTTCGTGAACCGAGTTGTTTCTTCAATGTTCAACACAGTCTCAGGGAAGAAGATTGCTGTTTTGGGATTTGCTTTCAAGAAGGACACCGGTGACACTAGAGAGACTCCTGCGATCGATGTGTGCAAGGGTTTATTGGGAGACAAAGCTAAGTTGAGCATTTATGATCCTCAAGTTTCTGAAGAGCAAATCTTGAAGGATTTGGCAATGAAGAAATTTGATTGGGATCATCCCGCTCATCTTCAACCAACAAGCCCAACAACTTCCAACAAGCAAGTGTCCGTGGTTTGGGACGCGTATGAGGCTATTAAGGATGCACATGGTGTGTGCATTATGACTGAGTGGGATGAGTTCAAGAACCTCGATTACAAAAAAGTTTTTGACAACATGCAGAAACCTGCATTTATCTTTGATGGAAGAAATGTTGTTGATGTGAAAAAGCTGAGGGAAATTGGTTTCATTGTTTATTCCATTGGAAAACCACTAGATGCTTGGCTCAAGGACATGCCTGCAGTGGCTTAA 1446 0.4426 MVKICCIGAGYVGGPTMAVIALKCPEIEVAVVDIAAPRINAWNSDHLPIYEPGLDDVVKECRGRNLFFSTDVEKHVAEADIVFVSVNTPTKTQGLGAGKAADLTYWESAARMIADVSKSDKIVVEKSTVPVKTAEAIERILTHNRKGINFTILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGQKAIHALRDVYAHWVLLDRILCTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHSIGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVANYWKQVIKVNDYQKSRFVNRVVSSMFNTVSGKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKAKLSIYDPQVSEEQILKDLAMKKFDWDHPAHLQPTSPTTSNKQVSVVWDAYEAIKDAHGVCIMTEWDEFKNLDYKKVFDNMQKPAFIFDGRNVVDVKKLREIGFIVYSIGKPLDAWLKDMPAVA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02864 481 Gene3D - 241 479 - -
Trre9g02864 481 PIRSF UDPglc_DH_euk 1 481 IPR028356 GO:0003979
Trre9g02864 481 Pfam UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 186 IPR001732 GO:0016616|GO:0051287
Trre9g02864 481 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 214 IPR036291 -
Trre9g02864 481 Gene3D - 209 240 - -
Trre9g02864 481 SUPERFAMILY UDP-glucose/GDP-mannose dehydrogenase C-terminal domain 315 464 IPR036220 -
Trre9g02864 481 Gene3D - 1 208 - -
Trre9g02864 481 Pfam UDP-glucose/GDP-mannose dehydrogenase family, central domain 210 304 IPR014026 GO:0016616|GO:0051287
Trre9g02864 481 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 210 309 IPR008927 -
Trre9g02864 481 PIRSF UDPglc_GDPman_dh 2 468 IPR017476 GO:0016616
Trre9g02864 481 FunFam UDP-glucose 6-dehydrogenase 241 479 - -
Trre9g02864 481 SMART UDPG_MGDP_dh_C_a_2_a 328 453 IPR014027 GO:0016616|GO:0051287
Trre9g02864 481 NCBIfam nucleotide sugar dehydrogenase 3 449 IPR017476 GO:0016616
Trre9g02864 481 FunFam UDP-glucose 6-dehydrogenase 209 240 - -
Trre9g02864 481 PANTHER UDP-GLUCOSE DEHYDROGENASE/UDP-MANNAC DEHYDROGENASE 1 479 IPR028356 GO:0003979
Trre9g02864 481 FunFam UDP-glucose 6-dehydrogenase 1 208 - -
Trre9g02864 481 Pfam UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 328 452 IPR014027 GO:0016616|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02864 Trre-Chr9 36520403 36521848 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02864 K00012 - gmx:100799142 928.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g02025 7 16037525 16039054 Trre9g02864 9 36520403 36521848 PCT