Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02818 ATGCTTCCAGAATTTTGCCAGGCAGCAATTGAACATCTTTCTGGAACAAGAGACAATCATGTAGTAGCTCATAGTGAAATTGATGAGATAAACGGCCAGCGAGATCCCATAAGGAGAAATACAAGTTCCGCGATCTTAGATCCAACTTCTTCACATAGGAATGTCGAAAAGCCAATACTCATCATGAAAAAAACTAGTGAAGTGGATATTTTAAATGACGGTTTTAGATGGCAAAAATATGGTCAGAAAGATATCATATCAAAGGACACTCTTACCCTAGGAGCTACTACAAATGTGCAACACCAGGTTGCAACATTAGGAAGCATGTAG 330 0.3879 MLPEFCQAAIEHLSGTRDNHVVAHSEIDEINGQRDPIRRNTSSAILDPTSSHRNVEKPILIMKKTSEVDILNDGFRWQKYGQKDIISKDTLTLGATTNVQHQVATLGSM 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02818 109 SUPERFAMILY WRKY DNA-binding domain 65 87 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre9g02818 109 Gene3D WRKY domain 59 94 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre9g02818 109 ProSiteProfiles WRKY domain profile. 66 85 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02818 Trre-Chr9 35841132 35842375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02818 11 83 WRKY Transcription Factor Family AT1G13960 46.154 1.47e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02818 - - lang:109349541 88.9669