Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02761 ATGTCAATCATCCCTCGAGTAACTCCTTTGCTTCGTCTTAATAGCTCCACTATAGAGTGGTGTATAAAAGTAAGAGTAGTACGTATGTGGAACATTAAAAGCGACATGAATCCTTGCAAAATTTCTGAGATTCATATGATATTGCTTGACCAGGAGGGTAAAAAGATTCAAGCTACTATTCCTGCTCAATGTGTCGATCTCTTCTCGAATGTTTTATATGAAGATTCTGTCTACATGATTGCTTTTTTCCATGTCAAAGATAACCTTATCCCATCTATGACCACCTTGAATCAGTTCCGGTTGCTTTTTTGCTCGACGACCACAGTGATTCCTTCTCACAGTTTCAGTATTGGTTATTATTCATTGATGTTATTCCATTCTGAAAAGATTAGCAACTATCGATATGGGTTAAGTTATTTGATTGATGTGATTGGAGTCGTCAGTGCTGTTCATGAAATTCCATCTCATGAAAAGAGTCAATATACCGCTTCTGCTGTTAAAGTTACATTAACTGATAGGAGAGGTCATTTTGAGTGTATTCTATGTGGATCCTATGGTGATGATTTTAAGATTATGATGCTCGAATCTTGCTCAAAGATTCCGATATTGCTGTTGCAGTTTGTTAGGATCATCAGTAAAAACGGTATCGCATATATTGAAACATGTGAACAAATCACCAAAGTTCTACTCAATCCCCCTATTATTGAGGTGGAGAGGTTTAAGATTGATATTGGTTATGGCAATGGTTCCATTATGTCTGATAACAAAGTGAATTATTCAAGCTCCAGATCCTCTAAACTTTTGGAATTCAATGGGTTGTATCCTCACAAGACTATATATGAGTTTATTAACATGATGGAGGATGGATTGTTTGTGTTGTGTGGAAAAGTGGCTGGTCTTTTCAAAGTTAATCAGTGGTTTTATCCTGTTTGTCATTGTGGCGCATTTTTGAACATAAGCTTTGGTTCATATCGTTGTGTTCAGTGCTGCATTACTGTGTTCAGTGCTGTGTCTAGGTGTAATCTTCAAGTTTCCATACGAGATAACAGCTCTGCTGCACTGTTACCAATGACTTATAATTTGATTGAAGGGATTGATTGCCTTGACATTAATGGATCTCCCTTTGTGCTGAGCACTGATGCAGCTAAAGCGTTGCTTGACAAGCAAGTGTTGATGATTGTAAAGAAAATTAAAAGAGCTGATGAGTTATCAGATGATGTTGTTGAAGTACTTCGAATTACTGATGACATTCATTTGATCAAGCAATTTTATTTGAATGACAACAATTTTACCCCAGCCAAGAGCATCTTCTCAAATACTTGTGGTGATTTACAATATGACCTTCCTTTGATTGGAAGTATGTCCGCTGATGCTGTTTCTGTTGCGGCTGGAAAGACAGTACTGGCTGAAGATCATTTCCAAATGTTGGTAGATGTATCCGCTGCTGAGTACCAAAAGAAATACAAAGATATCAAATTGCATAATAATGTGGTTGATGGTGAAGGATGCTCTTCCAATAATATATAA 1527 0.3694 MSIIPRVTPLLRLNSSTIEWCIKVRVVRMWNIKSDMNPCKISEIHMILLDQEGKKIQATIPAQCVDLFSNVLYEDSVYMIAFFHVKDNLIPSMTTLNQFRLLFCSTTTVIPSHSFSIGYYSLMLFHSEKISNYRYGLSYLIDVIGVVSAVHEIPSHEKSQYTASAVKVTLTDRRGHFECILCGSYGDDFKIMMLESCSKIPILLLQFVRIISKNGIAYIETCEQITKVLLNPPIIEVERFKIDIGYGNGSIMSDNKVNYSSSRSSKLLEFNGLYPHKTIYEFINMMEDGLFVLCGKVAGLFKVNQWFYPVCHCGAFLNISFGSYRCVQCCITVFSAVSRCNLQVSIRDNSSAALLPMTYNLIEGIDCLDINGSPFVLSTDAAKALLDKQVLMIVKKIKRADELSDDVVEVLRITDDIHLIKQFYLNDNNFTPAKSIFSNTCGDLQYDLPLIGSMSADAVSVAAGKTVLAEDHFQMLVDVSAAEYQKKYKDIKLHNNVVDGEGCSSNNI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02761 508 Gene3D - 112 245 IPR012340 -
Trre9g02761 508 Gene3D - 270 412 IPR012340 -
Trre9g02761 508 SUPERFAMILY Nucleic acid-binding proteins 8 115 IPR012340 -
Trre9g02761 508 Gene3D - 6 111 IPR012340 -
Trre9g02761 508 CDD RPA1_DBD_A_like 21 109 - -
Trre9g02761 508 Pfam Domain of unknown function DUF223 46 113 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02761 Trre-Chr9 34886522 34888939 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02761 5 215 Core DNA Replication Machinery Family AT5G45400 25.792 2.74e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02761 - - tpra:123914989 415.616