Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02741 ATGGCGATAACAATCGAACTATACCCCAAATTCTTCTTCCCCCAAAATCCAATTCCAAAACCCTTCATAAACCCTAATTTCAATCCCAAATGTAAAAAATCTTATCAAATTTCCAAACCAATTGCTCAATTTTCTCATCAACCAACAACCACCACCTCAAACCGTGGAATAATTTTCCGGGAAAAAGTTCTTTACCTCCAGAAACTCAAAGTGAATCCAGAAAAAGCCTTCAAACAAAACCCTAATCTTCGATGTTGTCCTCTAACAACCCTAGAATCGGTTGAACAATGTCTTTCATCAATTGGCATACAAAGAAGCCAAATGGGTCGAATTCTCGATATGCTTCCTCAACTTCTCACGTGTGAACCACACAATGATATTTACCCCCTTATTGATTTTCTTCTCAATGAGGTTGAAATTCCTTACAATCATGTTCAAAAATCAATCTTGCGGTGTCCTAGATTGTTAGTTAGTAGTATTGAGAATCGATTAAGACCTGCACTTTGTTATTTGAAGGAATTAGGGTTTGTTGGGTCACATTCTCTCACGTGCCAAACTACATTGCTTTTGGTTTCAAGTGTTGAGGGTACCCTTATCCCTAAAGTTGAATTTTTGATGGGTTTGGGGTTCACACGTGCTGAGGTTTCGAAAATGGTTTTGAGGTCACCGGCTTTGTTGACTTATAGTGTGGCTAATAATTTGGTTCCAAAACTCGATTTTTTCTTGAATGAGATGAATGGTGATGTTGCTGAATTGAAAAAGTATCCTCAGTATTTCTCTTTTAGCTTGGAAGGGAGGATTAAGCCGAGACATGCTATGTTGGTTCGGCTTGGTTTATCGCTTCCTTTGCCAGAAATGTTGCAGGAAAATGGTGATGATAGACACTTATACAGTTGGTAA 900 0.3833 MAITIELYPKFFFPQNPIPKPFINPNFNPKCKKSYQISKPIAQFSHQPTTTTSNRGIIFREKVLYLQKLKVNPEKAFKQNPNLRCCPLTTLESVEQCLSSIGIQRSQMGRILDMLPQLLTCEPHNDIYPLIDFLLNEVEIPYNHVQKSILRCPRLLVSSIENRLRPALCYLKELGFVGSHSLTCQTTLLLVSSVEGTLIPKVEFLMGLGFTRAEVSKMVLRSPALLTYSVANNLVPKLDFFLNEMNGDVAELKKYPQYFSFSLEGRIKPRHAMLVRLGLSLPLPEMLQENGDDRHLYSW 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02741 299 PANTHER CGI-12 PROTEIN-RELATED 57 287 IPR003690 GO:0003690|GO:0006355
Trre9g02741 299 SMART mt_12 146 177 IPR003690 GO:0003690|GO:0006355
Trre9g02741 299 SMART mt_12 109 141 IPR003690 GO:0003690|GO:0006355
Trre9g02741 299 SMART mt_12 216 248 IPR003690 GO:0003690|GO:0006355
Trre9g02741 299 SMART mt_12 180 211 IPR003690 GO:0003690|GO:0006355
Trre9g02741 299 SMART mt_12 249 280 IPR003690 GO:0003690|GO:0006355
Trre9g02741 299 SMART mt_12 74 104 IPR003690 GO:0003690|GO:0006355
Trre9g02741 299 Pfam mTERF 137 290 IPR003690 GO:0003690|GO:0006355
Trre9g02741 299 Pfam mTERF 75 175 IPR003690 GO:0003690|GO:0006355
Trre9g02741 299 Gene3D Transcription termination factor 3, mitochondrial 36 290 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02741 Trre-Chr9 34587614 34590342 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre9g02741 mTERF 6e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02741 K15032 - gmx:100785219 335.109