Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02726 ATGAAAAATCAAAGTATGCATTTTGTTCCATCAACTGATTCAAAACCAAGACTCAGATGGACTACTGATCTTCACCAAACATTCATTGATGCAATTAATCAACTGGGAGGTGCAGATAAAGCAACACCAAAGAGTATAATGAGGGTGATGGAAATTCCAGGACTTACTTTGTACCATCTAAAGAGCCATTTACAGAAATATAGACTTGGGGAAAGCCAACAACAAGAAACCTGCTCTGACTACAAACAACAAGAAATCAAGACTAGTGATGATCATTGTAGCAGAGAAATCAGTCTTGGGGATCAGAGTCAAATCACTGAAAACTTGGAGATAGCTCAAGCTCTAGAAATGCAAATGGAAGTAGAAAAGAAACTTTTTGAACAAATTGAGGTGCAGAAACATTTGCAGCTTCGAATCGAAGCTCAAGGAAAGTATTTACAATCGGTACTAACGAAGGCGCAAGAAGTACTTTGTGGACACAATTCTTCACCAATTGGTATAAAACACACAAAAGATGAACTCTCTCAATTGGTTACCATGGTCAACAATGCTTGTCCAAATTCTCCATTCTCAGAACTAACAGAATCAAGAGGATTGAGTTCAAACTGTGGTAAGAGGAAACAGAACAATGGAACTATGTGTTCATTGGAAAGTTCTTTAACATCTTCAGAATCCTCAGAAAGAAAAGAAGACAAAAATTCAATAGAAGAAATAGTAGAGTTCAAAAATTCCAATACTATTTCACTAATGGCCATGCACTCAGAAGATAAATCAGTGTCATGTCCGATGTCTGTGTCTGTGGTTCATAGTTATGATTCTTCTAATGGGAGAAAGAGAAATGCAGAAACTAAATTTGATACTAGTAGCTATTTTGAGGAATCTTCAAACAGGAAAAGATGTGGCAACAAGTTGAAGAAAGCTAAGTTGTCAGAAGAAATGTTGGACTTGAACAGAAAATGTCAGAATGATATGGAATCAACAAGTTCAAAAACATTATTATTAGACTTAAATTGCAGTTTGAACTTTTGTGAACCATGA 1038 0.3574 MKNQSMHFVPSTDSKPRLRWTTDLHQTFIDAINQLGGADKATPKSIMRVMEIPGLTLYHLKSHLQKYRLGESQQQETCSDYKQQEIKTSDDHCSREISLGDQSQITENLEIAQALEMQMEVEKKLFEQIEVQKHLQLRIEAQGKYLQSVLTKAQEVLCGHNSSPIGIKHTKDELSQLVTMVNNACPNSPFSELTESRGLSSNCGKRKQNNGTMCSLESSLTSSESSERKEDKNSIEEIVEFKNSNTISLMAMHSEDKSVSCPMSVSVVHSYDSSNGRKRNAETKFDTSSYFEESSNRKRCGNKLKKAKLSEEMLDLNRKCQNDMESTSSKTLLLDLNCSLNFCEP 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02726 345 Pfam Myb-like DNA-binding domain 18 68 IPR001005 -
Trre9g02726 345 SUPERFAMILY Homeodomain-like 14 69 IPR009057 -
Trre9g02726 345 FunFam Myb family transcription factor 14 72 - -
Trre9g02726 345 Gene3D - 14 71 - -
Trre9g02726 345 NCBIfam myb-like DNA-binding domain, SHAQKYF class 15 70 IPR006447 GO:0003677
Trre9g02726 345 Coils Coil 112 132 - -
Trre9g02726 345 Pfam MYB-CC type transfactor, LHEQLE motif 110 155 IPR025756 -
Trre9g02726 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 285 IPR044848 GO:0003700
Trre9g02726 345 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02726 Trre-Chr9 34387489 34389334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02726 6 195 G2-like Transcription Factor Family AT1G69580 56.716 6.41e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre9g02726 Myb_DNA-binding 3.8e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02726 - - tpra:123905031 505.753