Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02706 ATGCGACGATTGAATGCTCGAAATCGGGTCGATTCAAATCCAAAGCAAATGGATCCAACGGTGAAAAAGCTCCAAATCCGTTCCACAAATCTCTTCGCTCGCAACAACAACAACAACAATTCAAAATGTTTCTTTTTCAACAACGCTTTCATCGCTTCTCTCTTTTTCTCATTCCTCCTCATTTTTTCATATTACACTTTTTTTAATTCTCCGTCATCGGGAACCAGTTTCCGGTACCGGATTATTATCGACGGTGGAAGTACGGGAACTAGGGTTCATTTATTTAAATATAAGGTTAAAAATGCGTTGGATTTTGGGAAAAAAGGTTTGGATTCGATGAGAGTAAATCCGGGTTTATCGTCTTTTGCGGAGGATCCGGATGGAGCGGGTAGGTCAGTTTTGGAGCTGGTGGAGTTTGCGAAAAATCGGATCCCGAAGGAGAGCTGGAGGGAGACGGAGATTCGGCTTATGGCTACTGCTGGGATGAGGATGTTGGATATTGAAGTGCAGGAGAAGATTCTAGATTCTTGTAGGAAGGTTTTGCGTTCTTCTGGATTCAAGTTTAGTGATAATTGGGCTTCTGTTATAACAGGTTCTGATGAAGGAGTGTATGCTTGGGTTGTTGCTAATTATGCACTTGGAACTCTGGGAGGTGATCCTTTGGAGACAACTGGGATTATCGAACTTGGTGGTGCTTCTGCTCAGGTGACCTTTGTATCAAGAGAAGCGATGCTGCCTTTGTTCTCGCGCACCGTTAAATTTGGGAATGTCACTTACAACCTTTACAGCCACAGCTTGCTTCATTTTGGCCTGAATGTTGCTCATGACTCATGGAGAGAAGCAATTACATCAGGAGATTTAAACTTGGCTTCTCAATATATTCAGAAGGGGTTGCACATAGATCCTTGTACTCCTGCAGGGTACTCTTATAATGTTGATTCATGGAAGTCCTCTCCTAGCTCACACAGTGAAAAAAACCAACATCAGCCCACTGTCCAAACAAAGGGAAACTTTTCGGAGTGCAGATCTGCAGCATTGAAGCTATTACAGAAAGGGAAAGAATCATGTTCTTATCAGCATTGCGACATTGGATCAAATTTTATACCTAAGCTTCAGGGGAAATTTTTGGCTACAGAAAATTTCTTTCACACATCAAAGTTTTTTGGGTTGGGGCCACATGCCTATCTGTCCAAGTTGATGACTGCTGGGCAAGAATACTGCGGAGAGGATTGGTTAAAGCTGAAGAAAAAATATATCTCCCATGATAAGGAAGATTTACTTCGACATTGCTTCTCTTCGGCTTACATTGTTGCTCTGCTTCATGACAGTCTTGGGATTGGTATGGATGATGAGAGGATCAAAGTTGCTAGTCAGGTGGGAAGCATTCCGCTCGATTGGGCTCTGGGAGCTTTTATTATGCAAACTACAGCTGATGCAGATCCACAGAACCATAACTGGATTTCTGCCATTTTCAGCAATGAATCACCTACTCTCTTCTCACTGCTTGGAATACTTGTAATATTGTTGTTTACAGCATGGTCTATATCTAGGTGCAGGAAACCTCAATTGAAGACTATTTATGACCTAGAAAAGGGACGTTATATAACTACGCGAGTTGGTAGATAA 1626 0.4213 MRRLNARNRVDSNPKQMDPTVKKLQIRSTNLFARNNNNNNSKCFFFNNAFIASLFFSFLLIFSYYTFFNSPSSGTSFRYRIIIDGGSTGTRVHLFKYKVKNALDFGKKGLDSMRVNPGLSSFAEDPDGAGRSVLELVEFAKNRIPKESWRETEIRLMATAGMRMLDIEVQEKILDSCRKVLRSSGFKFSDNWASVITGSDEGVYAWVVANYALGTLGGDPLETTGIIELGGASAQVTFVSREAMLPLFSRTVKFGNVTYNLYSHSLLHFGLNVAHDSWREAITSGDLNLASQYIQKGLHIDPCTPAGYSYNVDSWKSSPSSHSEKNQHQPTVQTKGNFSECRSAALKLLQKGKESCSYQHCDIGSNFIPKLQGKFLATENFFHTSKFFGLGPHAYLSKLMTAGQEYCGEDWLKLKKKYISHDKEDLLRHCFSSAYIVALLHDSLGIGMDDERIKVASQVGSIPLDWALGAFIMQTTADADPQNHNWISAIFSNESPTLFSLLGILVILLFTAWSISRCRKPQLKTIYDLEKGRYITTRVGR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02706 541 Pfam GDA1/CD39 (nucleoside phosphatase) family 75 477 IPR000407 GO:0016787
Trre9g02706 541 Gene3D Exopolyphosphatase. Domain 2 197 460 - -
Trre9g02706 541 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 54 481 IPR000407 GO:0016787
Trre9g02706 541 CDD NBD_sugar-kinase_HSP70_actin 81 239 - -
Trre9g02706 541 Gene3D - 78 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02706 Trre-Chr9 34194962 34201092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02706 12 475 Nodulin-like Gene Family AT4G19180 27.879 2.11e-44 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02706 K01510 - gmx:100807287 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre9g02706 9 34194962 34201092 Trre9g02706 9 34194962 34201092 ECH