Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02684 ATGTCTATCTGCATTAGATTATTCACTATGAAACAGACAGTTCAAGCTAATGCCAACAATATACCAAAAGACTTTGACCCTTCTGATGTTCGCCATCAGAAAGGGAGCTACGCAGAAGCACTGGCCAATCATGAAAGAGAACAAACCATAAACAAGGCAACAGTCAAACAGTGGAGGTTAGCTTTGCAAGAAGCAGCAAATCTGGTAGGTTGGCATTTCAAACACAGGAACGACTGCGAGTATGAGTTCATTGGGAAGATCATTCAAAAGATCTCAGAAAATATTAATCGTAGACATTTACATGTTGCTAAATACCCTGTCGGGATGCATGACTTGATTGAAGATATGGGTAGAGAAATTGTGTGGCTGGAACCACCCTCAAAGCCAGGTGAACGCAGTAGATTATGGTTCTCCAAAGATATTCTTCATGTTTTCAAAGAGAATAAGGGATCTGATAAAGCCGAGGTCATCATGCTACGTCCACTCAAAGATCTGTCCAATGGGATGGAAATGCATTGA 519 0.4104 MSICIRLFTMKQTVQANANNIPKDFDPSDVRHQKGSYAEALANHEREQTINKATVKQWRLALQEAANLVGWHFKHRNDCEYEFIGKIIQKISENINRRHLHVAKYPVGMHDLIEDMGREIVWLEPPSKPGERSRLWFSKDILHVFKENKGSDKAEVIMLRPLKDLSNGMEMH 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02684 172 Gene3D - 8 103 IPR035897 -
Trre9g02684 172 Pfam TIR domain 25 95 IPR000157 GO:0007165
Trre9g02684 172 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 71 IPR035897 -
Trre9g02684 172 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 103 159 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02684 Trre-Chr9 33741700 33744960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02684 107 159 WRKY Transcription Factor Family AT4G12020 45.283 5.39e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02684 - - ahf:112802991 124.79