Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02668 ATGGATTTGAACACCCCAATACGATCCAACACCACTCCCCTCTCCAGCTCAGTCTTCAAATCTAAACTCATTTTCTTGCATGAATGGTGGCTCATGAAGCCTCAAAACCAGTGCAACGGTTTAGCTCTTGCTGGCATTGCTTCGATGGAGAGAGAAAGAATGTTTTTTTCCTCTGTGATTGTAAAGAGACATGAACCCAATGTTGTAGAGACTGAAGATGGCGTCACAATAATCATCCGTGGTTTTATTAACTCCTCTCGTACATCTCAAAATGGATTTCCCTCCGACGTATGTCGCCGGTTCTCAGTTGGATTTCCACACAATTGGAAAAATTATTCAGTTGACAGTTCAGGAAATGAATGTCAATATGTGGATAAAGTTACCGGTTTTGATGACTCAAATGCTTTTTCCCACAAAAAAACAGCGGATGAGATTTCTCATGAAGCTATGGAAGCTGAAGATAACGACAATATTGCGAGTATTAGGTTGTCTCAACCACAGGTTGGCGTGGCTTATAATGGTGAAAATAGAGTCTCAGATGTTGACGACTTAAATCCTTGCCACAAAAAGAAAGCTGATGTGACTTCACAGGAAGCTATGGAAGCTGAAGATAACAACAATATCGGGGGTCTTAGGTTATCTCAACCGCAGGTTGATTTGATTAATAATAGTGAAAATGGAGTCTCAATTGCTGCTGCAGCCGAAAGTAATCAATCTTTGATGGGTGTGTTTGAATTTGATCCTATCCATGAGCAAAGCAATGTTACGTCTCCAATTTACCCAAAGAAATTAGAATTTGAACAATTATCAAGTGATCGCAAGGAGAAAAAACGTATCAAGAAGATTGTAGAGGATACTAGTAGTTTGTGTAGCAGGGTCCTGACAAGAAGCATTGCCAAAAAAAGTCACATGATGCTTAAAAGGGATGGGAAAGCTGAAGTAAAATGTTCTAGTTGTCCTGTTAGAAGATCTCCCAGGATATATAGGTGTAGTTGGCATAGGATTTGGGGACCTTTGGAATGTTCAAATTGGTGCCTCAGGAAGCATATTCTATAA 1056 0.3996 MDLNTPIRSNTTPLSSSVFKSKLIFLHEWWLMKPQNQCNGLALAGIASMERERMFFSSVIVKRHEPNVVETEDGVTIIIRGFINSSRTSQNGFPSDVCRRFSVGFPHNWKNYSVDSSGNECQYVDKVTGFDDSNAFSHKKTADEISHEAMEAEDNDNIASIRLSQPQVGVAYNGENRVSDVDDLNPCHKKKADVTSQEAMEAEDNNNIGGLRLSQPQVDLINNSENGVSIAAAAESNQSLMGVFEFDPIHEQSNVTSPIYPKKLEFEQLSSDRKEKKRIKKIVEDTSSLCSRVLTRSIAKKSHMMLKRDGKAEVKCSSCPVRRSPRIYRCSWHRIWGPLECSNWCLRKHIL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02668 351 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 18 281 - -
Trre9g02668 351 Pfam SANTA (SANT Associated) 24 112 IPR015216 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02668 Trre-Chr9 33553376 33555903 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trre9g02668 SANTA 9.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02668 - - tpra:123906974 468.003