Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02656 ATGAACGTGGATCTGGAATCCTTGGCAGAAGCCACTTCTGGAGCCATAGGATCATTGCTTAGCACAACAATTCTCTACCCACTTGATACCTGCAAAACTAAGTATCAAGCTGAGGCACGTTCTCATGGTAACAGAAAGTACAAGAATCTCTCTGATGTGTTATGGGAAGCGATATCTAACCGTCAGATTCTTTCGCTTTACCAGGGCCTTGGAACAAAAAATCTTCAATCCTTCTTTTCACAGTTTGTCTACTTCTATGGTTATAGTTACTTTAAAAGACTGTATCTTGAAAAAAGTGGATATAAATCCATCGGAACAAGAGCAAACTTGTTAATTGCTGCTGCTGCTGGGGCTGTCACAGCCATTACAACTCAGCCCCTGGATACAGCCTCTTCGAGGATGCAGACAAGTGCCTTTGGAAAATCTAAAGGGCTACTGAAAACCCTTACAGAAGGCACATGGAGCGATGCATTTGATGGCCTTAGCATTTCCTTGATGCTCACCTCAAACCCTGCAATTCAGTATACAGTGTTTGATCAGCTGAAAAACCGAGTACTGACAAATAACCAAAACATATCCGAGAAAGGAGTATCTCCAACATCACTGTCTGCATTTATGGCCTTCCTTTTAGGTGCAATTTCGAAGAGTATTGCTACCTGTCTAACATATCCTGCTATCAGGTGCAAAGTAATCATTCAAGCTGCAGACGCGGATGAAGAATCTTCCAAAAAACTGATAAAATCGCCGAAAACCGTGTCCAGCGTTCTCTATGGAATATGGAAAAAGGAGGGAATTTTGGGCTATTTTAAAGGATTACATGCTCAGATATTGAAAACTGTTTTGAGCTCGGCATTGCTCCTGATGATCAAGGAGAAAATCTCTGCTACTACTTGGGTCCTTATACTTGCAATTAAAAGGTATCTCTTACTCCCAAAGGGTAGGGTTAAGAACTTGTAA 957 0.4148 MNVDLESLAEATSGAIGSLLSTTILYPLDTCKTKYQAEARSHGNRKYKNLSDVLWEAISNRQILSLYQGLGTKNLQSFFSQFVYFYGYSYFKRLYLEKSGYKSIGTRANLLIAAAAGAVTAITTQPLDTASSRMQTSAFGKSKGLLKTLTEGTWSDAFDGLSISLMLTSNPAIQYTVFDQLKNRVLTNNQNISEKGVSPTSLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADADEESSKKLIKSPKTVSSVLYGIWKKEGILGYFKGLHAQILKTVLSSALLLMIKEKISATTWVLILAIKRYLLLPKGRVKNL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02656 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Trre9g02656 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Trre9g02656 318 FunFam Peroxisomal adenine nucleotide carrier 1 3 297 - -
Trre9g02656 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Trre9g02656 318 Pfam Mitochondrial carrier protein 202 294 IPR018108 -
Trre9g02656 318 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Trre9g02656 318 Pfam Mitochondrial carrier protein 104 188 IPR018108 -
Trre9g02656 318 Gene3D Mitochondrial carrier domain 3 297 IPR023395 -
Trre9g02656 318 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Trre9g02656 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02656 Trre-Chr9 33185114 33188433 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02656 23 312 Chloroplast and Mitochondria Gene Families AT1G25380 25.987 1.79e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02656 - - gmx:100787682 537.339