Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02654 ATGAAGGTCCTTAAGAAGATCTTGAAGGAAGGAGAGGGATATGAACAACCAAATGATGGAGCTATGATTCAAGTGAAACTTATCGGGAAGCTGCAAGATGAGACTGTCTTCCTTAAGAAGGGTCATGATGATGATCAGCCATTTGAGTTCAGAATTGATGAAGAACCAGTAATTGATGGACTTGATAGAGCTGTGAAGAACATGAAGAAAGGGGAAATTGCGTTGGTGATCATACAACTTGATCGAATGCTTTTGGTTAATCTGCTCAGGAATTGGCTATTGTTCCTCCTAATTCCACTGTTTACTATGAAGTTGAGCTGA 321 0.3988 MKVLKKILKEGEGYEQPNDGAMIQVKLIGKLQDETVFLKKGHDDDQPFEFRIDEEPVIDGLDRAVKNMKKGEIALVIIQLDRMLLVNLLRNWLLFLLIPLFTMKLS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02654 106 Gene3D - 1 83 IPR046357 GO:0003755
Trre9g02654 106 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 79 - -
Trre9g02654 106 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 14 79 IPR001179 GO:0003755
Trre9g02654 106 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 20 78 IPR001179 GO:0003755
Trre9g02654 106 SUPERFAMILY FKBP-like 3 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02654 Trre-Chr9 33160482 33161021 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02654 2 87 Calmodulin-binding Proteins AT3G25230 65.517 1.09e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02654 K09571 - gmx:100810243 134.035