Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre9g02602 | ATGTCTCATGGCCAGTCCCAAATGGTTAAAGCAGCGACGCCACTCCACAAGGCAATGGAATATGAGACAACTACGGCGGAGATGCCACTTTTTACCGCGGCACCGTCAACACCAAAAACGTTTATTTATGATGGTTACTTGAGAACTATGCAAAAAACTAACTACGAAGGTGACGGAAACAGTTTCATATATCTCTATGGCAACCTCGACTTAACAATCATAGCTGCTCGCCGGTTACCTAACATGGATATCGTTTCAGAGCGTTTTCGCCGCTGCGTAACCACTTGCGATACTATTAAATACAGTTCAACAAATTGA | 318 | 0.4371 | MSHGQSQMVKAATPLHKAMEYETTTAEMPLFTAAPSTPKTFIYDGYLRTMQKTNYEGDGNSFIYLYGNLDLTIIAARRLPNMDIVSERFRRCVTTCDTIKYSSTN | 105 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Trre9g02602 | Trre-Chr9 | 32031003 | 32031320 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trre9g02602 | 63 | 97 | Phospholipase D Gene Family (Wang group) | AT4G35790 | 57.143 | 1.19e-08 | 49.3 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre9g02602 | K01115 | - | gmx:100801787 | 70.8626 |