Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02594 ATGGGGAAAGGAAGAAGTCCTGGGAAATGGATCAAGAACTTACTCTATGGGAAGAAATCATCGTCTAACTCGAAGTCTAGTTCATCGAAAAAGAATGACATTTTTAAATCGTCGAGTAACAAGGATCCGTTGGGATCTTCTGAGTTAACTGTGTCAAATCCAATTCCAACTATGGATTCTTTGATGATATCCCCGCCGATTTCTGGATCTAATGCTGCTAAAGGAGTGGTTTCAGAAAAGGAAGTAATTAACGGGCCATCTCGTGAGCGGGAGATTCTCTCAAATGGAGACGGAGAGGGTCGTGCAGAAGCTGTTGCTAATTTTGCATCTCAAGATGATCGTGAGACAGTCAGGCTTACAGAAGCAGCTATTAAACTTCAATCTGCTTGCAGAGGCTATCAGGCTCGTCGGGAATTTCAAAGACTCAAAAGTATCACACAGCTGCAAGCTCTTATTCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATATTGTGTGAAGAAAATTGTTAAGTTCCAAGCATTGGCTCGTGGTTACAATGTTAGGCGTTCTGATATTGGGCTTGAGGTCCTAAAAATTCGTAAGGATACTCAACTTTCAAAATCTACTGGCGTAGTTCCATCTACAGAGGCAGGGAAGCTGTCAGAAAATGTCTTTGTTTGGAAGCTACTGGCTTCATCTCCCCATGCTTTTCCTCTATCTTTCAATACTGATCTTGGAGAACCTTACTTGGCTTGGAAGTGGCTTGACCGATGGACAAGGTCACACTTTTGGGCATCTCTTCCTAAATTGAAGAAACTTGACTCGGTGTCTGATGAAAAAAATATCAGTTGTCAAACAGTTGAAAAGGGACAAGTTAAAAGGAATACCCGGAAGTCTCCTGCCGTGAAAGCTGATGATGGCTCAAGTTCAGGTTCTAATAAATATAAACAGCGTCCCAAAAAGGATTCAAATCACTCATTGGTTTCAGCTCAGGAACACCCAAAGACAGAAATTGAGAAAAGTAGTCTAAAGAAAACTTGCATGCAGAATGTTTCAGACAGATCTGAGGCTGTTAACGAGAAAAGAAAACAAAGCTCTAGGACAACTACAGATCATAATGTTACAGATGTCGCAGAGCGGGGGCCAAATACCACTTCAGAGAAAATGAAAGGTACAATGGTGTCAAAGTCAAAGTCAGAAGAGTGTTATCCTGAGAAAGTTCTTGGACAGAAAATACAAGAAGAGAATAATGATAAGTCGAAGAGCTTAAATGGTGGTGCCAAGGAAGAGAAAGGTATTGGACAGAAAACACTAGAAGAGAATAACGATAAGCCAAAGAAGAGCTTTAATGGAAGTGCCAAAGAAGAGAAAGGTCTTGGACAAAAAGCACTAGAAGAGAATAATGATAAACCAAAGAAGAGCTTAAATGGAGGTGCTAAAGAAGATAAAGGTCTTGGACAGAAAGCACTAGAAGAGAATAGTGATAAGCCAAAAAAGAGCTTAAATGGCAGTGCCAAAGAAGTGAAATGTCTTGGACAGAAAGCACTAGAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAATGGCGGTGCCAAAGAAGGGAAAGGTCTTGAACAGAAAGCTCTAGAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAGTGGCGGTGTCAAAGAAGAGAAAAGTCTTGGAAAGAAAGCACCAGAAGAGAAAGGTCATAATGATCCCAGTGCTGTCTTACAGACTAGTGTGAAGAATGTAGGAGATGAAAAAATAGGAGTTAGCGAAGACTTAAATGGCAGTGAGAAAATCATCAGCAACAATTACCAAAGAAGAGCTTCACTACCTGCTAATTTTAATGATCAAGAAAATGAGTTACATAACACTCCAAGATTGCCGAGTTATATGGCTCCTACTGAATCAGCAAAAGCTAGGCTAAGGGGACAAGGCTCCCCAAGATTTGCTACTGATATATTAGACAAAAACAGTTTAACCAGGAGGCATTCACTTTCATCTTCTATTAACAGCAAGTCAGGTTCTTTTTCCCCAAGAGCAGAAAAGCTGTTAACTTTGAGCGGAAGAGGAGTTGCAAGGACTGATAAATCTCTGTCATCTTCAAGGGACAAATCTCTGTCATCTTCAAGGGATGGGACTGGTAAGCATTTATAA 2157 0.4043 MGKGRSPGKWIKNLLYGKKSSSNSKSSSSKKNDIFKSSSNKDPLGSSELTVSNPIPTMDSLMISPPISGSNAAKGVVSEKEVINGPSREREILSNGDGEGRAEAVANFASQDDRETVRLTEAAIKLQSACRGYQARREFQRLKSITQLQALIRGHLVRRQAVSALYCVKKIVKFQALARGYNVRRSDIGLEVLKIRKDTQLSKSTGVVPSTEAGKLSENVFVWKLLASSPHAFPLSFNTDLGEPYLAWKWLDRWTRSHFWASLPKLKKLDSVSDEKNISCQTVEKGQVKRNTRKSPAVKADDGSSSGSNKYKQRPKKDSNHSLVSAQEHPKTEIEKSSLKKTCMQNVSDRSEAVNEKRKQSSRTTTDHNVTDVAERGPNTTSEKMKGTMVSKSKSEECYPEKVLGQKIQEENNDKSKSLNGGAKEEKGIGQKTLEENNDKPKKSFNGSAKEEKGLGQKALEENNDKPKKSLNGGAKEDKGLGQKALEENSDKPKKSLNGSAKEVKCLGQKALEENNDKPKKSLNGGAKEGKGLEQKALEENNDKPKKSLSGGVKEEKSLGKKAPEEKGHNDPSAVLQTSVKNVGDEKIGVSEDLNGSEKIISNNYQRRASLPANFNDQENELHNTPRLPSYMAPTESAKARLRGQGSPRFATDILDKNSLTRRHSLSSSINSKSGSFSPRAEKLLTLSGRGVARTDKSLSSSRDKSLSSSRDGTGKHL 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02594 718 ProSiteProfiles IQ motif profile. 141 170 IPR000048 GO:0005515
Trre9g02594 718 MobiDBLite consensus disorder prediction 351 365 - -
Trre9g02594 718 MobiDBLite consensus disorder prediction 617 718 - -
Trre9g02594 718 SMART iq_5 166 188 IPR000048 GO:0005515
Trre9g02594 718 SMART iq_5 141 162 IPR000048 GO:0005515
Trre9g02594 718 SMART iq_5 118 140 IPR000048 GO:0005515
Trre9g02594 718 MobiDBLite consensus disorder prediction 661 681 - -
Trre9g02594 718 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Trre9g02594 718 MobiDBLite consensus disorder prediction 283 596 - -
Trre9g02594 718 MobiDBLite consensus disorder prediction 16 53 - -
Trre9g02594 718 Pfam Protein of unknown function (DUF4005) 618 689 IPR025064 -
Trre9g02594 718 MobiDBLite consensus disorder prediction 1 53 - -
Trre9g02594 718 MobiDBLite consensus disorder prediction 366 388 - -
Trre9g02594 718 Gene3D - 116 166 - -
Trre9g02594 718 PANTHER IQ-DOMAIN 5-RELATED 448 672 - -
Trre9g02594 718 MobiDBLite consensus disorder prediction 389 499 - -
Trre9g02594 718 MobiDBLite consensus disorder prediction 507 569 - -
Trre9g02594 718 MobiDBLite consensus disorder prediction 311 338 - -
Trre9g02594 718 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Trre9g02594 718 Pfam IQ calmodulin-binding motif 169 185 IPR000048 GO:0005515
Trre9g02594 718 Pfam IQ calmodulin-binding motif 120 140 IPR000048 GO:0005515
Trre9g02594 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 116 161 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02594 Trre-Chr9 31474829 31478407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02594 606 711 IQD Protein Family AT1G14380 48.624 4.87e-20 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02594 - - tpra:123907401 1170.61