Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre9g02590 ATGCAACAGTTTCTTTCTTTTTTCAAGCCTCAGAATATGAAGAATTTCTTGGTTTCTTTATTCTTCTTGTTTCCTACAATCTTTACCATTATTCTTGTGCTACTCACACCAATTCCTAGTGCACAATTAACACCAAGTGAAACTAGAATTCTTCTTCAACTTCAAACTCTTCTTGAATTTCCTCAAGTTCTTCATAAATGGAACAATCTCACCAACTTCTGCAACATCCCTTCATCACCATCATTCAACATTATCTGCTCAAAGAATCATATAACAGAATTAACCATCACCGGTAACAAAACAAGACCAGTTTCTTGGAGTTCAAGTAATCTTTCACAAAGATTTTCCATTGAATCTTTTTTCACTATTTTAACAAAACTTTCAAATATGAAGGTTTTGTCATTGGTGTCACTTGGTTTGTGGGGTACATTACCTTCAAAAATCAATAGGTTTAAGTCACTTGAAGTTTTCAATATTTCTTCAAATTTTTTGTATGGAAAAATTCCATCATCAGTTTCTTCAATGACAAGTCTCAAGAGTCTTGTTTTGGCTGATAATTTTTTCAATGGAAGTGTTCCTAATCTCAATAGATTAGTCTCTCTTGAAGAGGTTAATTTTGTTAATAACAGATTAGGACCTGAATTTCCTTCATTTTTGTTCTCTCTTCCTTTGCTAAATCACCTAAACTTGGCTTCAAATCAATTCAATGGTTCAATTTCTTTGAATATATCTTGTGATTCTGCTCTTACATTTGTTGATATCTCAAACAATTTTCTACAAGGAAATTTCTCTTCCTGCATTGATTCGAATTCGTTGAATCGAACGATAGTTTATTCCGGTAATTGCTTATTAAGCAGAAATCTCAGTGATCAACATCCATCTTCATATTGCAACAAATCGCCGGCCTTTTCTACTAAGCCGACAAGATTCGAGAGACGGAATGAATCAAAGATGCAACTAGGATCAATACTTGGTATTGTTGGAGGTTTTGTTGGAATTGTAGGACTTATGATTATACTTTTTCTTTTCATTTCGAAAAAGTCCGAAACAAAAAAAGCTTTAAAATCTGTTGATGATAGAGTTTCTGTCACTGCATATTCAAGACCAAATATTTTTACAAGGAGTAATGTTCCTAAGTTAATGAGGTTAACTTCAATTGGATTAAGACCATACAACATTTTCACAATAGAAGAAATTGAAGATGCAACCAATAAATTTGATCCATCAAATCTAATAGAAGAAGGATCACAAGGACAGCTATATAAAGGTAGGGTCAAAGATGGTTCAACGGTGATGGTTAATATTGTAAAACTAAAGCAGAAGAGTTTGAGCAAAATCAGTGATGAGAACTTGAAGGTGTTACCTTGTTTAAGGCATAGGCATTTGGTGAGTGTGTTAGGACACTGTGCCATTACTTATAAGGACAATCCCAACATGACAAGCACAATATTCATTGTATTTGAGCATATCTCAACTATGTCATCATTGAGGATTCATCTTACAGATAGGAGAAAAATGCTGAAGTGGAAACAAAGAATGACAATTATGATAGGCATTGCAAGAGGAATTCAATACTTACATAGAGGAGTTAATAATGGAATATTTGGAAACAACTTAAAGATTGAGAACATTCTATTAGACAATAATCTCAATCCAAAAGTTAGTGGATATAGCATTCCATTTCCATCCAAGAAAGGTTCTGAAAAATTACTTAAAGAACAAAATTCACACAATCATATTGGCAGCATCAATAATGCAGAAAAGGAAGACATATATCAATTTGGTGTGATTCTACTTGAAGTTATAACTGGGAAACTAATTACATCTTCTATTGAAGTAGAAGTTTTGAAATATGAGCTTGAGAGAGGTTTATCTGAAGTTGCATCACCAACTGCATTGAGGAGCGCAATCGATCCTTCTCTTCATGGAACTTATACACACGAATCGTTAAAGACTGCAATTCAGATCACCATCAATTGTCTCAATAAGGTTCCCGGTAATCGTCCTTCGATAGAAGATATTCTCTGGAATCTGCAGTACTCCATGCAAGTTCAAGAGGCAAGGTCTAGCATAACATCATCATGA 2085 0.3376 MQQFLSFFKPQNMKNFLVSLFFLFPTIFTIILVLLTPIPSAQLTPSETRILLQLQTLLEFPQVLHKWNNLTNFCNIPSSPSFNIICSKNHITELTITGNKTRPVSWSSSNLSQRFSIESFFTILTKLSNMKVLSLVSLGLWGTLPSKINRFKSLEVFNISSNFLYGKIPSSVSSMTSLKSLVLADNFFNGSVPNLNRLVSLEEVNFVNNRLGPEFPSFLFSLPLLNHLNLASNQFNGSISLNISCDSALTFVDISNNFLQGNFSSCIDSNSLNRTIVYSGNCLLSRNLSDQHPSSYCNKSPAFSTKPTRFERRNESKMQLGSILGIVGGFVGIVGLMIILFLFISKKSETKKALKSVDDRVSVTAYSRPNIFTRSNVPKLMRLTSIGLRPYNIFTIEEIEDATNKFDPSNLIEEGSQGQLYKGRVKDGSTVMVNIVKLKQKSLSKISDENLKVLPCLRHRHLVSVLGHCAITYKDNPNMTSTIFIVFEHISTMSSLRIHLTDRRKMLKWKQRMTIMIGIARGIQYLHRGVNNGIFGNNLKIENILLDNNLNPKVSGYSIPFPSKKGSEKLLKEQNSHNHIGSINNAEKEDIYQFGVILLEVITGKLITSSIEVEVLKYELERGLSEVASPTALRSAIDPSLHGTYTHESLKTAIQITINCLNKVPGNRPSIEDILWNLQYSMQVQEARSSITSS 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre9g02590 694 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 492 694 - -
Trre9g02590 694 SUPERFAMILY L domain-like 50 284 - -
Trre9g02590 694 SUPERFAMILY Protein kinase-like (PK-like) 387 678 IPR011009 -
Trre9g02590 694 Gene3D Transferase(Phosphotransferase) domain 1 493 693 - -
Trre9g02590 694 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 44 220 - -
Trre9g02590 694 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 90 679 - -
Trre9g02590 694 Gene3D Phosphorylase Kinase; domain 1 372 475 - -
Trre9g02590 694 ProSiteProfiles Protein kinase domain profile. 406 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre9g02590 694 Gene3D Ribonuclease Inhibitor 44 308 IPR032675 -
Trre9g02590 694 Pfam Protein kinase domain 412 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre9g02590 Trre-Chr9 31453316 31456158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre9g02590 60 687 Miscellaneous Gene Families AT3G03770 35.901 9.20e-147 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Trre9g02590 Pkinase 1.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre9g02590 - - mtr:11414733 1010.75